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updated 7 hours ago by
Gordon Smyth
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Apprentice
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updated 6 months ago by
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Billy Rowell
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written 19 hours ago by
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21 hours ago by
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18 hours ago by
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1 day ago by
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updated 17 hours ago by
Paulo
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written 11.2 years ago by
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2 days ago by
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gulin
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updated 2 days ago by
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paulanavarrete116
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updated 1 day ago by
lieven.sterck
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written 6 days ago by
Jl
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updated 19 hours ago by
Istvan Albert
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updated 3 days ago by
lieven.sterck
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written 3 days ago by
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3 days ago by
SomeOne
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updated 3 days ago by
yura.grabovska
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written 3 days ago by
zhang616123
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updated 3 days ago by
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written 3 days ago by
Jonathan Yoou
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3 days ago by
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updated 4 days ago by
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written 4 days ago by
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Recent Replies
Answer: Issues with T2T in pigeon prepare from isoseq
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anbayega
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Got the same error using T2T. I will wait to see if there's a quick fix.
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If you don't want to mess with compiling bleeding-edge bcftools, you could write the same thing in awk. There's no need to filter out the …
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I would be using divided counts for transcript-level analyses from RSEM, and using log-CPM from the divided counts for clustering, for the …
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Hey @kbranger ,
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is this onboard or basespace or ICA? dragen
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That is pretty odd. Like you were advised above you could try to open an issue with the devs. I don't think I have ever seen this problem. …
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With nextflow you don't want to manage paths manually. Instead of creating a hardcoded path you should let it output the results into whate…
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[Affinity propagation][1] is the answer to all my clustering needs
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Thanks Istvan, this seems like a reasonable enough solution that could be scripted across large batches of files. I'll give it a shot. Was …
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No I don't, when I said errors I mean it shows 267 samples for the adapter content while I just have 50 samples of paired-end read = 100 re…
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Do you have any oddities in samp…
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This is hacky and definitely not prod ready, but if the goal is to get the length and not the sequence, you could use bcftools/paste/bc to …
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you probably want to be working wihta bam file for this ..
Comment: MultiQC_report
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![enter image description here][1]
Here is the screenshot, in this report multiqc missed 3 samples (6 reports ) and still made the error…
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Once you slice the reference genome, the positions in the VCF won't match the reference. For your method to work you would need to shift th…
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