1 hour ago by
enee
▴
20
0
votes
0
replies
14
views
10
votes
9
replies
4.7k
views
0
votes
1
reply
42
views
0
votes
2
replies
85
views
0
votes
1
reply
121
views
updated 6 hours ago by
lieven.sterck
15k
•
written 1 day ago by
lagartija
▴
160
0
votes
0
replies
48
views
1
vote
7
replies
2.3k
views
0
votes
1
reply
97
views
updated 5 hours ago by
colindaven
7.4k
•
written 12 hours ago by
Gordonz9494
•
0
837
votes
170
replies
175k
views
112 follow
updated 10 days ago by
Biostar
3.5k
•
written 8.4 years ago by
Istvan Albert
102k
0
votes
1
reply
111
views
0
votes
4
replies
203
views
2
votes
4
replies
161
views
0
votes
1
reply
112
views
7
votes
6
replies
4.8k
views
4
votes
5
replies
365
views
updated 1 day ago by
gernophil
▴
120
•
written 2 days ago by
Keem Uarren Eiryll
▴
10
4
votes
2
replies
142
views
3
votes
3
replies
356
views
updated 1 day ago by
colindaven
7.4k
•
written 6 days ago by
vikasmh111
•
0
0
votes
2
replies
143
views
1 day ago by
n_navy
•
0
0
votes
0
replies
85
views
1 day ago by
Physalia-courses
★
2.6k
0
votes
2
replies
425
views
0
votes
7
replies
294
views
0
votes
0
replies
110
views
0
votes
2
replies
195
views
18 hours ago by
Sarah
•
0
0
votes
0
replies
111
views
1
vote
6
replies
1.0k
views
6 follow
updated 1 day ago by
Ram
45k
•
written 10 months ago by
guioliveirareis
▴
10
0
votes
0
replies
118
views
2 days ago by
Physalia-courses
★
2.6k
0
votes
1
reply
154
views
5
votes
3
replies
262
views
updated 1 day ago by
Alex Reynolds
36k
•
written 2 days ago by
Besoa
•
0
3
votes
8
replies
432
views
2
votes
1
reply
206
views
1
vote
0
replies
152
views
2 days ago by
zsc25001
▴
10
1
vote
1
reply
193
views
updated 1 day ago by
Ram
45k
•
written 2 days ago by
arthur_alexander83
•
0
4
votes
4
replies
319
views
Tool:
Gene Exons Painter
updated 1 day ago by
benformatics
4.1k
•
written 2 days ago by
Rafal
▴
70
0
votes
0
replies
152
views
2 days ago by
soledad.esteban
•
0
3
votes
1
reply
230
views
0
votes
0
replies
133
views
0
votes
0
replies
146
views
3 days ago by
Physalia-courses
★
2.6k
4
votes
3
replies
275
views
updated 2 days ago by
Pierre Lindenbaum
166k
•
written 3 days ago by
1769mkc
★
1.3k
6
votes
2
replies
300
views
Tool:
RNAseq Power Calculator
3 days ago by
Rafal
▴
70
1
vote
2
replies
269
views
1
vote
4
replies
417
views
2 days ago by
AIMAR
•
0
3
votes
9
replies
673
views
1 day ago by
anton.avramov
•
0
0
votes
1
reply
266
views
2
votes
1
reply
271
views
updated 3 days ago by
Bastien Hervé
6.2k
•
written 5 days ago by
Pierre
▴
20
3
votes
4
replies
423
views
updated 2 days ago by
Pierre Lindenbaum
166k
•
written 5 days ago by
Mwangana
•
0
1
vote
2
replies
316
views
0
votes
3
replies
400
views
updated 6 days ago by
Bastien Hervé
6.2k
•
written 6 days ago by
txema.heredia
▴
210
1
vote
1
reply
288
views
0
votes
3
replies
379
views
0
votes
0
replies
242
views
Recent Votes
Recent Locations •
All
United Kingdom, just now
United States, 4 minutes ago
Oviedo, 4 minutes ago
Spain, 4 minutes ago
Karolinska Institutet, Sweden, 6 minutes ago
Italy, 10 minutes ago
Germany, 12 minutes ago
Recent Awards •
All
Commentator to
Kevin Blighe
89k
Popular Question to
Sergio A.S.
▴
10
Popular Question to
Physalia-courses
★
2.6k
Popular Question to
zea
▴
10
Popular Question to
analyst
▴
60
Popular Question to
tw_140
•
0
Recent Replies
Comment: Single cell demultiplexing using 10x and TotalSeq-B
by
txema.heredia
▴
210
> Did you find an answer?
Unfortunately, no.
> I was wondering if its better to use HTOdemux rather than the cellranger's version?
I tri…
Answer: bcftools query add header
by
DBScan
▴
480
In case somebody else stumbles upon this question, `-HH` disables the column numbers:
```
bcftools query -HH -f '%CHROM\t%POS\t%REF\t%AL…
Comment: Circular heatmap using circos.heatmap in R
by
GenoMax
151k
Please consider accepting the original answer (green check mark) to provide closure to this thread).
Comment: RNA-Sequencing Analysis when control samples paired-end and tumour samples singl
by
GenoMax
151k
> It seems to be that the control sample runs are paired end data with 2 fasta files whilst the 12 tumour samples are only single-end read…
Comment: Nextflow: split a FASTA file into 5 parts to enable parallel processing
by
GenoMax
151k
It may be useful to also indicate how you are running this code? Are you supplying a single fasta file name or five pieces?
> [[a, a1], [b…
Comment: 16S Libraries With Non-Purified Short Fragments
by
alenew.am
▴
10
Ok! Thank you for the suggestions
Comment: Circular heatmap using circos.heatmap in R
by
Yukta
•
0
@Bastien Herve thank you for the help, I understood the gap.degree and the clustering method. The code worked for me with my data also.
Comment: Nextflow: split a FASTA file into 5 parts to enable parallel processing
by
lieven.sterck
15k
no clue on nextflow but do assure that the split files are of equal size, otherwise you might get little gain from the splitting it, as one…
Comment: Combining scRNA-seq datasets that have been processed differently
by
dthorbur
★
3.0k
I would suggest only using these datasets for preliminary analyses. If you are trying to compare between cell types, any results you find w…
Comment: Circular heatmap using circos.heatmap in R
by
Bastien Hervé
6.2k
Let's say this is your original dataframe :
vst_data = rbind(cbind(matrix(rnorm(50*5, mean = 1), nr = 50),
mat…
Comment: 16S Libraries With Non-Purified Short Fragments
by
dthorbur
★
3.0k
Also, please only [cross post](https://biology.stackexchange.com/questions/116463/16s-libraries-with-non-purified-short-fragments) when abs…
Comment: Association (Protein interaction) in Intact database results what can really mea
by
Bendegúz
•
0
Thanks a lot for the help and clarification.
If one of the protein is a membranprotein and the other is protein has enzymefunction. Could …
Answer: Alternative to PASApipeline
by
lieven.sterck
15k
I'm not sure if there are any one-to-one replacements for PASA but there are for sure other tools that can do transcript alignment/reconstr…
Comment: HISTA2 with Cleaned Data
by
lieven.sterck
15k
You mention "counts are too low", why do you think so? can you put a number on it?
Does the SBATCH script runs but times-out or is it stuc…
Traffic: 2379 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6