10 minutes ago by
Ana
•
0
0
votes
2
replies
26
views
0
votes
1
reply
22
views
0
votes
0
replies
41
views
2 hours ago by
frarodmar17
•
0
0
votes
2
replies
1.3k
views
updated 3 hours ago by
aboozar.soorni
▴
30
•
written 4.6 years ago by
puipui
•
0
1
vote
1
reply
64
views
6
votes
9
replies
2.9k
views
0
votes
1
reply
63
views
updated 3 hours ago by
ATpoint
87k
•
written 5 hours ago by
dreamer247
•
0
0
votes
0
replies
74
views
836
votes
169
replies
172k
views
110 follow
updated 6 months ago by
Biostar
3.4k
•
written 8.3 years ago by
Istvan Albert
102k
0
votes
4
replies
640
views
updated 1 hour ago by
Arup Ghosh
3.3k
•
written 12 months ago by
Yixuan
•
0
1
vote
1
reply
108
views
12
votes
16
replies
18k
views
8 follow
updated 15 hours ago by
ngelbal
•
0
•
written 7.5 years ago by
alec_djinn
▴
390
0
votes
4
replies
143
views
1
vote
5
replies
136
views
updated 50 minutes ago by
GenoMax
150k
•
written 17 hours ago by
samuel.a.odonnell
▴
590
0
votes
4
replies
392
views
updated 19 hours ago by
Brian Bushnell
20k
•
written 6 days ago by
bge
•
0
0
votes
3
replies
190
views
updated 19 hours ago by
Mensur Dlakic
★
29k
•
written 1 day ago by
Gio
•
0
0
votes
1
reply
109
views
0
votes
4
replies
149
views
0
votes
0
replies
80
views
4
votes
10
replies
302
views
6 follow
0
votes
0
replies
64
views
6
votes
11
replies
718
views
1 day ago by
alexandrakortsi
•
0
0
votes
0
replies
84
views
1 day ago by
alwayshope
▴
40
0
votes
1
reply
126
views
updated 23 hours ago by
ATpoint
87k
•
written 1 day ago by
pinheirofabiano
▴
100
1
vote
1
reply
357
views
updated 1 day ago by
Alexander Blume
▴
10
•
written 7 months ago by
CTLong
▴
140
0
votes
0
replies
79
views
0
votes
0
replies
78
views
0
votes
0
replies
95
views
0
votes
1
reply
160
views
0
votes
7
replies
409
views
16 hours ago by
himanshu0102
•
0
1
vote
2
replies
198
views
7 hours ago by
bioinfo1990
▴
10
0
votes
0
replies
108
views
updated 15 hours ago by
Ram
45k
•
written 2 days ago by
Physalia-courses
★
2.6k
2
votes
2
replies
239
views
0
votes
1
reply
509
views
1
vote
1
reply
304
views
updated 3 days ago by
Gordon Smyth
★
7.9k
•
written 3 days ago by
Apprentice
▴
170
1
vote
1
reply
351
views
4
votes
6
replies
529
views
1
vote
2
replies
281
views
4
votes
7
replies
487
views
updated 50 minutes ago by
Istvan Albert
102k
•
written 4 days ago by
jahnreinhard.ringger
•
0
1
vote
14
replies
613
views
4
votes
3
replies
328
views
updated 1 day ago by
Yugan Gogul Muthukumar
▴
10
•
written 4 days ago by
jpeduprep
•
0
0
votes
0
replies
182
views
4 days ago by
Physalia-courses
★
2.6k
0
votes
2
replies
269
views
updated 15 hours ago by
Ram
45k
•
written 4 days ago by
Assa Yeroslaviz
★
1.9k
8
votes
4
replies
505
views
1
vote
12
replies
676
views
0
votes
0
replies
221
views
1
vote
3
replies
382
views
0
votes
1
reply
264
views
1
vote
1
reply
264
views
updated 1 day ago by
ATpoint
87k
•
written 5 days ago by
karlensberg
•
0
2
votes
9
replies
585
views
updated 5 days ago by
Pierre Lindenbaum
165k
•
written 6 days ago by
totoroGirl
•
0
Recent Votes
Recent Locations •
All
Turkey, just now
France, just now
United States, 1 minute ago
United States, 4 minutes ago
Switzerland, 7 minutes ago
United Kingdom, 7 minutes ago
UK, 10 minutes ago
Recent Awards •
All
Popular Question to
zizigolu
★
4.3k
Popular Question to
nilaylale88
•
0
Popular Question to
SushiRoll
▴
140
Popular Question to
Picasa
▴
660
Popular Question to
buffealo
▴
130
Popular Question to
aboozar.soorni
▴
30
Popular Question to
ev97
▴
40
Recent Replies
Comment: C.reinhardtii single-cell Seurat object - gene names instead of loci
by
Ana
•
0
Thank you for your answer!
Unfortunalety, NCBI doesn't have the latest version of the genome and annotations for this organism (v6.1), so I…
Comment: Has anybody worked with C.reinhardtii single-cell before and could help me get t
by
GenoMax
150k
It is always safer to get sequence/annotations from standard sources like NCBI/Ensembl so no manipulations are required to make the data wo…
Comment: MultiQC_report
by
GenoMax
150k
Moved this to an answer since it seems to be a logical explanation for the observation reported in original post.
Comment: Poor alignment rates using Bowtie
by
GenoMax
150k
Looking at the size distribution the data must already be pre-trimmed so it does not make sense to trim again. You should merge data from t…
Answer: MultiQC_report
by
Basti
★
2.0k
I think it just counts the total number of lines while there could be multiple adapters types per sample (ex : illumina_universal_adapter, …
Comment: Poor alignment rates using Bowtie
by
Istvan Albert
102k
If your reference has invalid bases then you can get quite unexpected behaviors.
I am not sure what takes place - probably the scoring is…
Comment: Is there a tool to obtain GO terms for thousands of genes at once?
by
Ana
•
0
I got it figured out, thanks!
Comment: Polishing raw nanopore reads with Pacbio
by
GenoMax
150k
Since only tools available (confirmed by @colindaven ) require illumina reads you would be basically creating "illumina like" reads from yo…
Comment: Extract length of sample sequence from vcf
by
Istvan Albert
102k
I would use a tool like cyvcf2
https://brentp.github.io/cyvcf2/
It provides a simple pythonic interface to VCF data. You can then easily …
Comment: Polishing raw nanopore reads with Pacbio
by
samuel.a.odonnell
▴
590
As in fragmenting (and pairing) the hifi reads? Do you think this would have any improvement over actual illumina reads?
Comment: Polishing raw nanopore reads with Pacbio
by
samuel.a.odonnell
▴
590
Thanks for confirming the absence of a tool, I think I can give up the hunt now. I've often done it this typical way of polishing after; ho…
Comment: About the Tool FASTP
by
shelkmike
★
1.5k
One problem that I encounter if I don't trim reads is that taxonomic classification of untrimmed reads often produces incorrect results. Th…
Comment: PopGenome lost individual information
by
Arup Ghosh
3.3k
Can you share the command you are using?
Comment: Discrepancy between positions on IGV and NCBI's PrimerBLAST
by
Rozita
▴
40
It showed me the same positions as that of PrimerBLAST.
Any idea how do I now visualise the publicly available datasets that I have and co…
Traffic: 2708 users visited in the last hour
Use of this site constitutes acceptance of our User Agreement and Privacy Policy.
Powered by the
version 2.3.6
version 2.3.6