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At least in this file there is no immediate smoking gun here. Does the log for successful `madsen` run look similar? Have you checked the S…
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Can you post the output of
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Yeah... you're right. Now I have done according to the post. The code I have used is
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Interesting, your analysis might be correct.
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It's not scaled. Scaled means centering data at a mean of zero. Your color code is still 0 to a larger value. Read the manual I posted.
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Thank you for your comment. I have tried with scaled data and I got the below heatmap. Is it correct?
![enter image description here][1]…
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You have to scale the counts first to emphasize differences. Clustering based on unscaled values emphasizes the magnitude of counts, not di…
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Hello Geno,
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> I looked online the according to everything the gff from miRBASE should have been compatible.
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Hi, just wanted to ask if you've got any answers?
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As awlays Geno, thank you so much for helping, although I thought the same thing, I looked online the according to everything the gff from …
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