Bioinformatic tool for acinetobacter plasmids
0
0
Entering edit mode
3.3 years ago
blur ▴ 280

Hi,

I am new to genomic sequencing and annotation and I have a genome that I was to bioinformatically check for plasmids.

I have PlasmidFinder installed, but my genome is Acinetobacter - and I don't think the database is appropriate (there is gram-positive and general eneterobacteria DB only).

Searching online I found PlasmidSeeker - the latesr db includes a list of Acinetobacter plasmids - is this the right/best tool for my analysis? Is there a better tool?

Any help would be appreciated,

plasmidseeker plasmidfinder plasmid • 1.1k views
ADD COMMENT
0
Entering edit mode

Thanks! That's very helpful

ADD REPLY

Login before adding your answer.

Traffic: 1400 users visited in the last hour
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6