setting overlap in DADA2 in qiime2
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2.3 years ago
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Hi,

I want to change the size of overlap in the DADA2 in QIIME2 The default is 12 - I'd like to try 4 and 8, as my reads are 150bp long.

I found a command --p-min-overlap in the documentation, but when I tried to run it on my QIIME version 2020.8, it does not appear to have this option.

Does anyone know if it is possible to set this parameter in my QIIME2 version?

Thanks

dada2 qiime qiime2 • 1.2k views
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I think the option was added from the 2021.4 version, and it is not available for your current version.

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I upgraded my version. Thank you

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