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23 months ago
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Hi,
I have been using snp-dists https://github.com/tseemann/snp-dists to assess distance between genomes, and I have strange numbers
seq1 to seq2 = 515 snps
seq1 to seq3 = 289 snps
seq2 to seq3 = 5 snps
I checked the example on the Github page (copied below) and it seems to me these numbers are strange as the example shhows the sum is logical
seq1 seq1 0
seq1 seq2 1
seq1 seq3 2
seq2 seq3 3
Any help will be appreciated