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21
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Forum: Rust bioinformatics projects ideas
projects scRNA-seq RNA-seq Rust
updated 19 months ago by 23k • written 2.3 years ago by ▴ 170
1
vote
1
reply
679
views
Which type of variant caller should I use in a WES normal cell line sample?
variant-caller WES
updated 2.0 years ago by 88k • written 2.0 years ago by ▴ 170
0
votes
0
replies
838
views
Picard's CollectGcBiasMetrics gc-bias plot- help with interpretation
picard gc-bias wes
2.1 years ago by bompipi95 ▴ 170
2
votes
3
replies
2.2k
views
Off-target % for whole-exome sequencing panel
WES
updated 2.1 years ago by ★ 1.9k • written 2.1 years ago by ▴ 170
0
votes
1
reply
950
views
WES variant calling with DNBSEQ-T7 - technical quality assessment
WES DNA-seq GATK variant-calling mutect2
updated 2.1 years ago by 7.6k • written 2.1 years ago by ▴ 170
0
votes
1
reply
12k
views
Comment: Comment: 10x 3' library creates R1 and R2 fastq files with the same read length
2.2 years ago by bompipi95 ▴ 170
0
votes
0
replies
869
views
Comment: Comment: Integrating single-nucleus RNA-seq and single-cell RNA-seq datasets
2.3 years ago by bompipi95 ▴ 170
0
votes
2
replies
869
views
Integrating single-nucleus RNA-seq and single-cell RNA-seq datasets
snRNAseq single-cell scRNAseq
2.3 years ago by bompipi95 ▴ 170
0
votes
0
replies
1.5k
views
Comment: Comment: Check my understanding - difference between number of reads sequenced and Seurat
2.3 years ago by bompipi95 ▴ 170
1
vote
2
replies
1.5k
views
Check my understanding - difference between number of reads sequenced and Seurat nCount_RNA
scRNAseq
2.3 years ago by bompipi95 ▴ 170
0
votes
0
replies
1.2k
views
Comment: Comment: issue with merging single cell data files
2.3 years ago by bompipi95 ▴ 170
0
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0
replies
4.5k
views
Comment: Comment: Rust bioinformatics projects ideas
2.3 years ago by bompipi95 ▴ 170
0
votes
0
replies
4.5k
views
Comment: Comment: Rust bioinformatics projects ideas
2.3 years ago by bompipi95 ▴ 170
0
votes
0
replies
4.5k
views
Comment: Comment: Rust bioinformatics projects ideas
2.3 years ago by bompipi95 ▴ 170
0
votes
0
replies
4.5k
views
Comment: Comment: Rust bioinformatics projects ideas
2.3 years ago by bompipi95 ▴ 170
0
votes
0
replies
2.2k
views
Comment: Comment: 1 is not found in chromosome sizes file
2.3 years ago by bompipi95 ▴ 170
2
votes
0
replies
1.3k
views
Answer: Answer: To batch correct or analyse separately?
2.4 years ago by bompipi95 ▴ 170
6
votes
3
replies
1.3k
views
To batch correct or analyse separately?
scRNA-seq batch-effect
updated 11 months ago by 45k • written 2.4 years ago by ▴ 170
4
votes
6
replies
1.9k
views
Aligning reads from mouse samples that express 1 human gene
realignment
updated 10 months ago by 15k • written 2.6 years ago by ▴ 170
0
votes
0
replies
1.9k
views
Comment: Comment: Aligning reads from mouse samples that express 1 human gene
2.6 years ago by bompipi95 ▴ 170
4
votes
1
reply
1.2k
views
t2t human reference genome for RNA-seq
t2t hs1 RNA-seq
updated 2.3 years ago by ▴ 740 • written 2.6 years ago by ▴ 170
1
vote
2
replies
9.8k
views
Comment: Comment: How can I learn how to create a bioinformatics pipeline?
2.6 years ago by bompipi95 ▴ 170
0
votes
0
replies
776
views
Answer: Answer: Close correlation between differentially-expressed genes
2.6 years ago by bompipi95 ▴ 170
6
votes
2
replies
1.4k
views
Identifying tumor vs normal cells in scRNAseq samples
seurat CNV scRNA-seq cancer
updated 2.8 years ago by 4.1k • written 2.8 years ago by ▴ 170
2
votes
2
replies
1.6k
views
Help with kallisto-bustools: how to interpret the inspect.json output file
scRNAseq bustools kallisto
updated 2.0 years ago by 45k • written 3.1 years ago by ▴ 170
1
vote
1
reply
1.6k
views
Answer: Answer: Help with kallisto-bustools: how to interpret the inspect.json output file
3.1 years ago by bompipi95 ▴ 170
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