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7
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0
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14k
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Answer: A: List all available databases for ANNOVAR
8.4 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
1
vote
2
replies
14k
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Comment: C: List all available databases for ANNOVAR
8.4 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
1
vote
1
reply
12k
views
Answer: A: Annotation for SV and CNV
8.4 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
0
votes
1
reply
1.7k
views
Overlap CNV with ENCODE DNAse-seq peaks
cnv dnase-seq dnase ENCODE
updated 8.4 years ago by ★ 3.2k • written 8.4 years ago by ★ 2.6k
0
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1
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3.6k
views
Answer: A: Using ReadDepth for non-human data
8.5 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
0
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0
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5.5k
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Comment: C: Bedtools sortBed | uniq and bash sort | uniq returns different number of lines
8.5 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
16
votes
7
replies
5.5k
views
Bedtools sortBed | uniq and bash sort | uniq returns different number of lines
sort bed uniq Bedtools bash
updated 8.5 years ago by 85k • written 8.5 years ago by ★ 2.6k
0
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1
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5.5k
views
Comment: C: Bedtools sortBed | uniq and bash sort | uniq returns different number of lines
8.5 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
0
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0
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5.5k
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Comment: C: Bedtools sortBed | uniq and bash sort | uniq returns different number of lines
8.5 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
0
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0
replies
4.1k
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Comment: C: gVCF files from 1000 Genomes samples
8.5 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
5
votes
1
reply
4.1k
views
Answer: A: gVCF files from 1000 Genomes samples
8.5 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
0
votes
0
replies
2.9k
views
Comment: C: Fast datastructure to get counts of overlapping reads per nucleotide (!) in Pyth
8.5 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
0
votes
1
reply
2.9k
views
Comment: C: Fast datastructure to get counts of overlapping reads per nucleotide (!) in Pyth
8.5 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
2
votes
1
reply
28k
views
Comment: C: samtools bedcov vs. bedtools coverage
8.5 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
3
votes
1
reply
2.9k
views
Comment: C: Fast datastructure to get counts of overlapping reads per nucleotide (!) in Pyth
8.5 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
3
votes
0
replies
2.9k
views
Comment: C: Fast datastructure to get counts of overlapping reads per nucleotide (!) in Pyth
8.5 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
3
votes
1
reply
3.5k
views
Quick method for calculating mean and standard deviation of read coverage of a chromosome.
read-depth coverage
updated 3.0 years ago by 44k • written 10.3 years ago by ★ 2.6k
6
votes
2
replies
2.9k
views
Answer: A: Fast datastructure to get counts of overlapping reads per nucleotide (!) in Pyth
8.5 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
4
votes
1
reply
28k
views
Comment: C: samtools bedcov vs. bedtools coverage
8.5 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
1
vote
0
replies
7.5k
views
Comment: C: using bedtools to find the intersect of bedpe and bed
8.5 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
4
votes
2
replies
7.5k
views
Answer: A: using bedtools to find the intersect of bedpe and bed
8.5 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
3
votes
1
reply
3.0k
views
Comment: C: Approaches for SV calling from De Novo assembly
8.5 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
3
votes
2
replies
2.4k
views
Sequence -> putative DNA binding proteins Database
transcription factors database
updated 8.5 years ago by ★ 4.0k • written 8.5 years ago by ★ 2.6k
5
votes
1
reply
2.9k
views
Answer: A: visual comparison of CNV data
8.5 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
1
vote
0
replies
7.1k
views
Comment: C: Annotation of Structural Variants and CNVs
8.5 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
1
vote
0
replies
2.6k
views
Comment: C: Existing methods to evaluate the performance of SV/CNV calling tools
8.5 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
1
vote
1
reply
2.8k
views
Comment: C: A fatal error has been detected by the Java Runtime Environment while running Ge
8.5 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
6
votes
2
replies
2.8k
views
Answer: A: Start position of structural variants in 1000 Genomes
8.5 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
4
votes
0
replies
1.8k
views
Answer: A: Gene length bias for ontology analysis.
8.5 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
8
votes
0
replies
4.3k
views
Answer: A: Pipeline of structural variation calling using multiple tools for multiple sampl
8.5 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
6
votes
1
reply
3.0k
views
Answer: A: Approaches for SV calling from De Novo assembly
8.5 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
6
votes
0
replies
3.3k
views
Answer: A: 1000Genome SV integrated map's power for SV filter
8.5 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
4
votes
0
replies
4.2k
views
Answer: A: Zygosity Of A Copy Number Variant
8.5 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
4
votes
0
replies
1.6k
views
Answer: A: How to Analyze CNV with Autism
8.5 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
0
votes
0
replies
2.9k
views
Answer: A: Prioritize structural variation (SV) callings supported by multiple softwares
8.5 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
0
votes
0
replies
3.1k
views
Answer: A: CNV tools for mitochondrial chromosome using whole-genome sequencing
8.5 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
2
votes
1
reply
7.1k
views
Comment: C: Annotation of Structural Variants and CNVs
8.5 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
0
votes
0
replies
2.2k
views
Comment: C: Allelic Depth 1000 Genomes call set
8.6 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
0
votes
2
replies
2.2k
views
Allelic Depth 1000 Genomes call set
AD GATK GATK HC 1000 Genomes
8.6 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
0
votes
1
reply
7.1k
views
Comment: C: Annotation of Structural Variants and CNVs
8.6 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
5
votes
2
replies
6.6k
views
Biopython: Change Sequence Id And Print Out New Sequence
biopython python fasta
updated 2.5 years ago by 44k • written 10.7 years ago by ★ 2.6k
0
votes
1
reply
3.2k
views
Calculate reciprocal overlap for thousands of samples
bedtools overlap cnv perl
updated 3.0 years ago by 44k • written 10.4 years ago by ★ 2.6k
0
votes
2
replies
2.8k
views
Mate pair positions using pysam
python pysam mate-pair
updated 2.1 years ago by 44k • written 9.3 years ago by ★ 2.6k
1
vote
1
reply
7.1k
views
Answer: A: Annotation of Structural Variants and CNVs
8.7 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
2
votes
1
reply
3.2k
views
Comment: C: Looking for comprehensive VCF from 1000 Genomes
8.7 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
0
votes
0
replies
3.2k
views
Comment: C: Looking for comprehensive VCF from 1000 Genomes
8.7 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
1
vote
1
reply
3.2k
views
Answer: A: Looking for comprehensive VCF from 1000 Genomes
8.7 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
1
vote
4
replies
3.7k
views
samtools depth -a while removing duplicates
samtools depth
updated 8.7 years ago by ▴ 60 • written 8.7 years ago by ★ 2.6k
0
votes
1
reply
3.7k
views
Comment: C: samtools depth -a while removing duplicates
8.7 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
0
votes
0
replies
6.3k
views
Comment: C: Esoteric Programming Languages
8.7 years ago by QVINTVS_FABIVS_MAXIMVS ★ 2.6k
242 results • Page 3 of 5
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