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Comment: Comment: Snakemake expand(): using a helper function (zip) and imputing wildcards?
23 days ago by Jesse ▴ 850
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293
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Comment: Comment: Remove a specific DNA sequence from the middle of sequencing reads
4 weeks ago by Jesse ▴ 850
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1
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923
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Comment: Comment: Find all sequences with adapters without trimming them off
9 weeks ago by Jesse ▴ 850
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923
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Answer: Answer: Find all sequences with adapters without trimming them off
10 weeks ago by Jesse ▴ 850
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238
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Comment: Comment: verifyBAMID in snakemake script error
11 weeks ago by Jesse ▴ 850
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342
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Answer: Answer: GGTree flips my trees
11 weeks ago by Jesse ▴ 850
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434
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Comment: Comment: temp directory as output in snakemake
4 months ago by Jesse ▴ 850
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557
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Answer: Answer: Missing Output Exception Error in Snakemake with output directory
4 months ago by Jesse ▴ 850
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769
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Comment: Comment: absolute path for symbolic links in Snakefile
6 months ago by Jesse ▴ 850
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769
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Answer: Answer: absolute path for symbolic links in Snakefile
7 months ago by Jesse ▴ 850
2
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567
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Answer: Answer: Hide positions in alignment with 99% "–" characters to ignore single sequence in
7 months ago by Jesse ▴ 850
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1.1k
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Comment: Comment: what's the genomic location and name of gene responsible for orange and black pa
7 months ago by Jesse ▴ 850
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315
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Comment: Comment: Alignment tool of repeat expansion detection
8 months ago by Jesse ▴ 850
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393
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Comment: Comment: Auxillary file
9 months ago by Jesse ▴ 850
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1.1k
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Comment: Comment: Generate unit-tested, ready-to-run pipelines using natural language prompting
9 months ago by Jesse ▴ 850
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611
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Comment: Comment: Missing wildcard in checkpoint rule - Snakemake
10 months ago by Jesse ▴ 850
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1.2k
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Comment: Comment: STAR ALIGNMENT
12 months ago by Jesse ▴ 850
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1
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679
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Comment: Comment: cutadapt 'cut_prefix' substring
13 months ago by Jesse ▴ 850
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543
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Comment: Comment: Pairwise Sequence Alignments with Numbered Antibody Sequences
14 months ago by Jesse ▴ 850
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631
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Comment: Comment: Biopython and Fab detection
15 months ago by Jesse ▴ 850
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0
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884
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Comment: Comment: The Biostar Herald for Monday, August 28, 2023
15 months ago by Jesse ▴ 850
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4.4k
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Comment: Comment: Conda/Mamba environment activation error
15 months ago by Jesse ▴ 850
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1
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1.2k
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Comment: Comment: cutadapt tool
16 months ago by Jesse ▴ 850
2
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0
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4.4k
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Comment: Comment: Conda/Mamba environment activation error
16 months ago by Jesse ▴ 850
2
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0
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558
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Answer: Answer: Snakemake excuting branching jobs
16 months ago by Jesse ▴ 850
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772
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Comment: Comment: Google launches Bard (and it fails the translation test :)
16 months ago by Jesse ▴ 850
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826
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Comment: Comment: snakemake and snakefile question.
16 months ago by Jesse ▴ 850
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835
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Comment: Comment: Extract information from files
16 months ago by Jesse ▴ 850
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0
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818
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Comment: Comment: With cutadapt, is it possible to completely trim reads to empty reads instead of
16 months ago by Jesse ▴ 850
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0
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529
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Answer: Answer: make error while installing MEGAcmd
16 months ago by Jesse ▴ 850
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1
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12k
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Comment: Comment: ChatGPT optimized for bioinformatics questions
17 months ago by Jesse ▴ 850
2
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1
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12k
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Comment: Comment: ChatGPT optimized for bioinformatics questions
17 months ago by Jesse ▴ 850
3
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1
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12k
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Answer: Answer: ChatGPT optimized for bioinformatics questions
17 months ago by Jesse ▴ 850
0
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0
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817
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Comment: Comment: motis SSR
17 months ago by Jesse ▴ 850
1
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0
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1.8k
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Answer: Answer: how to sort a fasta file
18 months ago by Jesse ▴ 850
1
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0
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1.5k
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Answer: Answer: BioInformatics, Software
18 months ago by Jesse ▴ 850
2
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0
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885
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Answer: Answer: Can any one suggest tools that generate "mind-maps" on concepts in biology/biote
18 months ago by Jesse ▴ 850
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1
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797
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Comment: Comment: BCR/TCR analysis using target capture sequencing data
18 months ago by Jesse ▴ 850
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0
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581
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Comment: Comment: Diverse sampling from MSA / phylogenetic tree?
18 months ago by Jesse ▴ 850
2
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0
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1.4k
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Comment: Comment: NCBI's IgBLAST version 1.21.0 is now available
18 months ago by Jesse ▴ 850
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0
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1.2k
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Answer: Answer: cutadapt: how to trim adapter dimers?
18 months ago by Jesse ▴ 850
1
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1
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925
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Answer: Answer: How to infer CDR1, CDR2, and CDR3 sequences from a TCR chain protein sequence?
19 months ago by Jesse ▴ 850
1
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0
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953
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Answer: Answer: take user options before calling snakemake
19 months ago by Jesse ▴ 850
2
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1
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1.6k
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Comment: Comment: msigdbr returns the same genesets for mouse as in for human,
20 months ago by Jesse ▴ 850
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1
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8.4k
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Comment: Comment: how to identify CDR region in antibody sequence
20 months ago by Jesse ▴ 850
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1
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8.4k
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Comment: Comment: how to identify CDR region in antibody sequence
20 months ago by Jesse ▴ 850
0
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0
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761
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Comment: Comment: Same pipeline produces different results
21 months ago by Jesse ▴ 850
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1
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761
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Comment: Comment: Same pipeline produces different results
21 months ago by Jesse ▴ 850
2
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1
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810
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Comment: Comment: Cause of short sequences in Amplicon Sequencing?
21 months ago by Jesse ▴ 850
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0
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1.5k
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Comment: Comment: A way to get a list of determined and undetermined indexes using illumina intero
22 months ago by Jesse ▴ 850
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