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Comment:
Comment: Where to upload and store annotated genetic variant data online?
2.1 years ago by
Hasib
▴ 20
1
vote
3
replies
851
views
Where to upload and store annotated genetic variant data online?
mutation
annotated
cancer
database
variant
updated 2.1 years ago by
GenoMax
152k • written 2.1 years ago by
Hasib
▴ 20
0
votes
0
replies
744
views
Circos plot with link data using RCircos
Circos
SV
plot
RCircos
2.8 years ago by
Hasib
▴ 20
0
votes
0
replies
44k
views
Comment:
Comment: read depth using samtools
2.8 years ago by
Hasib
▴ 20
0
votes
1
reply
44k
views
Comment:
Comment: read depth using samtools
2.8 years ago by
Hasib
▴ 20
0
votes
0
replies
263k
views
Comment:
Comment: Tools To Calculate Average Coverage For A Bam File?
2.8 years ago by
Hasib
▴ 20
0
votes
1
reply
44k
views
Comment:
Comment: read depth using samtools
2.8 years ago by
Hasib
▴ 20
0
votes
1
reply
14k
views
Comment:
Comment: Correct way to calculate VAF (Variant allele fraction) from a VCF file
2.8 years ago by
Hasib
▴ 20
0
votes
0
replies
14k
views
Comment:
Comment: Correct way to calculate VAF (Variant allele fraction) from a VCF file
2.8 years ago by
Hasib
▴ 20
0
votes
0
replies
2.0k
views
Comment:
Comment: Circos plot from SV data of WES samples
2.8 years ago by
Hasib
▴ 20
1
vote
0
replies
2.0k
views
Comment:
Comment: Circos plot from SV data of WES samples
2.8 years ago by
Hasib
▴ 20
4
votes
4
replies
2.0k
views
Circos plot from SV data of WES samples
Circos
SV
plot
2.8 years ago by
Hasib
▴ 20
0
votes
0
replies
504
views
BreakDancer output file doesn't have any SV detection from the Tumor BAM file
SV
BreakDancer
2.9 years ago by
Hasib
▴ 20
0
votes
0
replies
752
views
Comment:
Comment: Breakdancer-max command not found during SV detection
2.9 years ago by
Hasib
▴ 20
2
votes
2
replies
752
views
Breakdancer-max command not found during SV detection
SV
detection
breakdancer
2.9 years ago by
Hasib
▴ 20
0
votes
1
reply
14k
views
Comment:
Comment: Correct way to calculate VAF (Variant allele fraction) from a VCF file
2.9 years ago by
Hasib
▴ 20
0
votes
0
replies
543
views
Allelic fraction from WES data
Fraction
VAF
Whole-exome
sequencing
Allelic
3.0 years ago by
Hasib
▴ 20
0
votes
0
replies
1.2k
views
Comment:
Comment: User error in GATK CreateSomaticPanelOfNormals
3.0 years ago by
Hasib
▴ 20
0
votes
2
replies
1.2k
views
User error in GATK CreateSomaticPanelOfNormals
gatk
CreateSomaticPanelOfNormals
user-error
3.0 years ago by
Hasib
▴ 20
0
votes
0
replies
2.0k
views
Comment:
Comment: vcftools site quality score -1 in GATK Mutect2 vcf files
3.3 years ago by
Hasib
▴ 20
0
votes
1
reply
2.0k
views
Comment:
Comment: vcftools site quality score -1 in GATK Mutect2 vcf files
3.3 years ago by
Hasib
▴ 20
0
votes
6
replies
2.0k
views
vcftools site quality score -1 in GATK Mutect2 vcf files
mutect2
vcftools
gatk
updated 2.0 years ago by
Ram
45k • written 3.3 years ago by
Hasib
▴ 20
0
votes
0
replies
2.0k
views
Comment:
Comment: vcftools site quality score -1 in GATK Mutect2 vcf files
updated 2.0 years ago by
Ram
45k • written 3.3 years ago by
Hasib
▴ 20
0
votes
0
replies
416
views
Help understanding VarSifter v1.9
varsifter
3.4 years ago by
Hasib
▴ 20
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