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0
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4.5k
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limma goana or kegg
R goana
updated 2.6 years ago by 44k • written 9.1 years ago by ▴ 600
0
votes
1
reply
2.4k
views
UCSC mouse gene annotation mm9 shows speculative genes
R
updated 2.4 years ago by 44k • written 9.4 years ago by ▴ 600
1
vote
1
reply
3.0k
views
samtools mpileup for multiple regions output in different files
sequencing
updated 2.4 years ago by 44k • written 9.4 years ago by ▴ 600
0
votes
1
reply
4.3k
views
Comment: C: meta analysis of p values from deseq2 output
updated 5.2 years ago by 44k • written 9.1 years ago by ▴ 600
0
votes
0
replies
4.3k
views
Comment: C: meta analysis of p values from deseq2 output
updated 5.2 years ago by 44k • written 9.1 years ago by ▴ 600
1
vote
0
replies
8.2k
views
Comment: C: featureCounts, strand specificity, reversely stranded
updated 5.2 years ago by 44k • written 9.1 years ago by ▴ 600
0
votes
0
replies
3.1k
views
Comment: C: encode data for RNAseq, type of library
updated 5.2 years ago by 44k • written 9.1 years ago by ▴ 600
0
votes
0
replies
2.3k
views
Comment: C: how the data should look like after the normalization
updated 5.2 years ago by 44k • written 9.3 years ago by ▴ 600
0
votes
1
reply
4.9k
views
Comment: C: PEER normalization after DESeq run
updated 5.3 years ago by 44k • written 9.3 years ago by ▴ 600
0
votes
1
reply
4.9k
views
Comment: C: PEER normalization after DESeq run
updated 5.3 years ago by 44k • written 9.3 years ago by ▴ 600
0
votes
1
reply
4.9k
views
Comment: C: PEER normalization after DESeq run
updated 5.3 years ago by 44k • written 9.3 years ago by ▴ 600
1
vote
1
reply
3.0k
views
Comment: C: featureCounts of subread
updated 5.3 years ago by 44k • written 9.4 years ago by ▴ 600
3
votes
4
replies
3.5k
views
installing blat for homer on os x
software-error blast
updated 2.7 years ago by 44k • written 9.9 years ago by ▴ 600
2
votes
6
replies
7.7k
views
SE reads in fr-firststrand, fr-secondstrand
rna-seq sequencing
updated 16 months ago by ▴ 140 • written 9.0 years ago by ▴ 600
2
votes
1
reply
3.0k
views
bioconductor promoter annotation for mm9
R genome
updated 2.4 years ago by 44k • written 9.5 years ago by ▴ 600
1
vote
1
reply
5.8k
views
would it be a good idea to normalize log2 fold changes with loess?
RNA-Seq ChIP-Seq
updated 2.6 years ago by 44k • written 9.1 years ago by ▴ 600
3
votes
2
replies
6.4k
views
DESeq PCA plot and edgeR MDS plot
R
updated 2.5 years ago by 44k • written 9.3 years ago by ▴ 600
6
votes
7
replies
5.8k
views
RSeQC infer_experiment.py results interpretation for cuffdiff and featureCounts
RNA-Seq
updated 2.6 years ago by 44k • written 9.1 years ago by ▴ 600
9
votes
8
replies
2.1k
views
Forum: Is it possible to change a username?
meta biostars
updated 22 months ago by 44k • written 8.3 years ago by ▴ 600
0
votes
1
reply
7.8k
views
Comment: C: demultiplexing with fastq having barcode and primer sequence
8.3 years ago by tonja.r ▴ 600
0
votes
1
reply
7.8k
views
Comment: C: demultiplexing with fastq having barcode and primer sequence
8.3 years ago by tonja.r ▴ 600
0
votes
0
replies
7.8k
views
Comment: C: demultiplexing with fastq having barcode and primer sequence
8.3 years ago by tonja.r ▴ 600
4
votes
11
replies
7.8k
views
demultiplexing with fastq having barcode and primer sequence
sequencing next-gen demultiplex
8.3 years ago by tonja.r ▴ 600
0
votes
2
replies
7.8k
views
Comment: C: demultiplexing with fastq having barcode and primer sequence
8.3 years ago by tonja.r ▴ 600
4
votes
2
replies
3.3k
views
demultiplexing with fastq but without barcode read fastq
next-gen sequencing
updated 8.4 years ago by ▴ 40 • written 8.4 years ago by ▴ 600
0
votes
0
replies
4.2k
views
Comment: C: single end reads, reverse and forward primer
8.4 years ago by tonja.r ▴ 600
1
vote
3
replies
4.2k
views
single end reads, reverse and forward primer
next-gen
updated 8.4 years ago by 15k • written 8.4 years ago by ▴ 600
2
votes
6
replies
5.1k
views
H3K4me3 and H3K27ac double peaks near TSS
ChIP-Seq
updated 2.4 years ago by 44k • written 9.4 years ago by ▴ 600
0
votes
3
replies
2.7k
views
chip-seq (histone modifications) and rna-seq data for benchmarking
RNA-Seq ChIP-Seq
updated 2.6 years ago by 44k • written 9.1 years ago by ▴ 600
0
votes
0
replies
5.8k
views
Comment: C: RSeQC infer_experiment.py results interpretation for cuffdiff and featureCounts
8.5 years ago by tonja.r ▴ 600
0
votes
1
reply
13k
views
Comment: Comment: Infer-experiment.py, is strand-specific?
updated 2.9 years ago by 44k • written 9.0 years ago by ▴ 600
0
votes
1
reply
13k
views
Comment: Comment: Infer-experiment.py, is strand-specific?
updated 2.9 years ago by 44k • written 9.0 years ago by ▴ 600
0
votes
1
reply
13k
views
Comment: Comment: Infer-experiment.py, is strand-specific?
updated 2.9 years ago by 44k • written 9.0 years ago by ▴ 600
0
votes
0
replies
7.7k
views
Comment: C: SE reads in fr-firststrand, fr-secondstrand
9.0 years ago by tonja.r ▴ 600
0
votes
1
reply
7.7k
views
Comment: C: SE reads in fr-firststrand, fr-secondstrand
9.0 years ago by tonja.r ▴ 600
0
votes
1
reply
13k
views
Comment: Comment: Infer-experiment.py, is strand-specific?
updated 2.9 years ago by 44k • written 9.0 years ago by ▴ 600
0
votes
1
reply
13k
views
Comment: Comment: Infer-experiment.py, is strand-specific?
updated 2.9 years ago by 44k • written 9.0 years ago by ▴ 600
0
votes
0
replies
5.8k
views
Comment: Comment: RSeQC infer_experiment.py results interpretation for cuffdiff and featureCounts
updated 2.6 years ago by 44k • written 9.0 years ago by ▴ 600
2
votes
1
reply
13k
views
Comment: Comment: Infer-experiment.py, is strand-specific?
updated 2.9 years ago by 44k • written 9.0 years ago by ▴ 600
0
votes
0
replies
1.9k
views
dispersion and variability of samples/replicates in DESeq2
RNA-Seq
updated 2.9 years ago by 44k • written 9.0 years ago by ▴ 600
0
votes
1
reply
2.7k
views
Comment: C: p-value distribution of edger or deseq2
9.0 years ago by tonja.r ▴ 600
1
vote
3
replies
2.7k
views
p-value distribution of edger or deseq2
RNA-Seq
updated 2.6 years ago by 44k • written 9.0 years ago by ▴ 600
0
votes
3
replies
3.1k
views
encode data for RNAseq, type of library
RNA-Seq
updated 2.5 years ago by 44k • written 9.2 years ago by ▴ 600
2
votes
2
replies
2.8k
views
high fold changes due to the low counts
RNA-Seq
updated 2.5 years ago by 44k • written 9.3 years ago by ▴ 600
0
votes
1
reply
2.6k
views
GFOLD diff input
RNA-Seq
updated 2.5 years ago by 44k • written 9.3 years ago by ▴ 600
0
votes
1
reply
2.0k
views
GFOLD posterior distribution
RNA-Seq R
updated 2.5 years ago by 44k • written 9.3 years ago by ▴ 600
0
votes
0
replies
2.7k
views
Comment: C: chip-seq (histone modifications) and rna-seq data for benchmarking
9.1 years ago by tonja.r ▴ 600
0
votes
0
replies
2.2k
views
Comment: C: looking for chip-seq histone marks and rna-seq data
9.1 years ago by tonja.r ▴ 600
0
votes
9
replies
4.3k
views
meta analysis of p values from deseq2 output
RNA-Seq
updated 2.6 years ago by 44k • written 9.1 years ago by ▴ 600
2
votes
2
replies
2.2k
views
looking for chip-seq histone marks and rna-seq data
RNA-Seq ChIP-Seq
updated 3.4 years ago by 44k • written 9.2 years ago by ▴ 600
148 results • Page 1 of 3
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