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Comment: C: Compute Phylogenetic Trees Using Snps Data (VCF files)
6.7 years ago by Denis ▴ 310
0
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1
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8.8k
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Answer: A: Extract SNPs flanking sequences based on VCF and genome Fasta files
6.8 years ago by Denis ▴ 310
13
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13
replies
8.8k
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6 follow
Extract SNPs flanking sequences based on VCF and genome Fasta files
snp sequence genome
updated 21 months ago by • 0 • written 6.8 years ago by ▴ 310
0
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0
replies
8.8k
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Comment: C: Extract SNPs flanking sequences based on VCF and genome Fasta files
6.8 years ago by Denis ▴ 310
0
votes
1
reply
8.8k
views
Answer: A: Extract SNPs flanking sequences based on VCF and genome Fasta files
6.8 years ago by Denis ▴ 310
0
votes
1
reply
8.8k
views
Comment: C: Extract SNPs flanking sequences based on VCF and genome Fasta files
6.8 years ago by Denis ▴ 310
12
votes
1
reply
5.8k
views
Extract SNPs from VCFfile located in genes based on GFF file information
gene snp
updated 6.8 years ago by 16k • written 6.8 years ago by ▴ 310
6
votes
2
replies
2.1k
views
A way to verify that GFF and Fasta files make a valid pair (came from the same project version)
assembly genome
6.8 years ago by Denis ▴ 310
2
votes
4
replies
2.2k
views
Multiple testing correction in linear mixed models (MLM) for GWAS
GWAS
updated 6.9 years ago by ▴ 280 • written 6.9 years ago by ▴ 310
0
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1
reply
4.1k
views
Comment: C: Different samples order in .ped and phynotype data files
6.9 years ago by Denis ▴ 310
0
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0
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4.1k
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Comment: C: Different samples order in .ped and phynotype data files
6.9 years ago by Denis ▴ 310
0
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0
replies
4.1k
views
Comment: C: Different samples order in .ped and phynotype data files
6.9 years ago by Denis ▴ 310
0
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1
reply
4.1k
views
Comment: C: Different samples order in .ped and phynotype data files
6.9 years ago by Denis ▴ 310
5
votes
11
replies
4.1k
views
Different samples order in .ped and phynotype data files
Plink GWAS R
6.9 years ago by Denis ▴ 310
0
votes
0
replies
3.9k
views
Comment: C: Number of bases with a certain quality in FASTQ file
6.9 years ago by Denis ▴ 310
0
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1
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3.9k
views
Comment: C: Number of bases with a certain quality in FASTQ file
6.9 years ago by Denis ▴ 310
0
votes
0
replies
3.9k
views
Comment: C: Number of bases with a certain quality in FASTQ file
6.9 years ago by Denis ▴ 310
0
votes
0
replies
3.9k
views
Comment: C: Number of bases with a certain quality in FASTQ file
6.9 years ago by Denis ▴ 310
7
votes
8
replies
3.9k
views
Number of bases with a certain quality in FASTQ file
next-gen sequencing
updated 6.9 years ago by 35k • written 6.9 years ago by ▴ 310
0
votes
0
replies
5.3k
views
Comment: C: Demultiplexing of the Illumina PE data
6.9 years ago by Denis ▴ 310
10
votes
16
replies
5.3k
views
Demultiplexing of the Illumina PE data
next-gen sequencing
updated 6.9 years ago by 151k • written 7.0 years ago by ▴ 310
0
votes
1
reply
5.3k
views
Comment: C: Demultiplexing of the Illumina PE data
7.0 years ago by Denis ▴ 310
0
votes
1
reply
5.3k
views
Comment: C: Demultiplexing of the Illumina PE data
7.0 years ago by Denis ▴ 310
0
votes
0
replies
5.3k
views
Comment: C: Demultiplexing of the Illumina PE data
7.0 years ago by Denis ▴ 310
0
votes
1
reply
5.3k
views
Comment: C: Demultiplexing of the Illumina PE data
7.0 years ago by Denis ▴ 310
0
votes
1
reply
5.3k
views
Comment: C: Demultiplexing of the Illumina PE data
7.0 years ago by Denis ▴ 310
0
votes
0
replies
991
views
Clustering 454 amplicon data
next-gen sequencing SNP
7.0 years ago by Denis ▴ 310
0
votes
0
replies
5.6k
views
Comment: C: Convert blast tabular output to bed format
7.1 years ago by Denis ▴ 310
4
votes
2
replies
5.6k
views
Convert blast tabular output to bed format
genome
7.1 years ago by Denis ▴ 310
0
votes
0
replies
1.1k
views
Minimal pool size for extreme qtl approach in plants
SNP GWAS QTL genome
7.1 years ago by Denis ▴ 310
2
votes
2
replies
2.9k
views
Analysis of paired-end GBS data
next-gen SNP genome
7.4 years ago by Denis ▴ 310
1
vote
0
replies
3.1k
views
Understanding Best-Hits filtering algorithm in BLAST+ applications
blast alignment
updated 7.6 years ago by 45k • written 7.6 years ago by ▴ 310
0
votes
0
replies
3.3k
views
Comment: C: Optimization of RNA-Seq data mapping with tophat2
7.8 years ago by Denis ▴ 310
0
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1
reply
3.3k
views
Comment: C: Optimization of RNA-Seq data mapping with tophat2
7.8 years ago by Denis ▴ 310
0
votes
1
reply
3.3k
views
Comment: C: Optimization of RNA-Seq data mapping with tophat2
7.8 years ago by Denis ▴ 310
0
votes
0
replies
3.3k
views
Comment: C: Optimization of RNA-Seq data mapping with tophat2
7.8 years ago by Denis ▴ 310
7
votes
12
replies
3.3k
views
Optimization of RNA-Seq data mapping with tophat2
RNA-Seq alignment
updated 7.8 years ago by ★ 1.6k • written 7.8 years ago by ▴ 310
0
votes
0
replies
3.0k
views
Comment: C: Software to in silico test restriction enzymes for GBS sequencing and similar ap
7.9 years ago by Denis ▴ 310
3
votes
2
replies
3.0k
views
Software to in silico test restriction enzymes for GBS sequencing and similar approaches
next-gen SNP genome sequencing
updated 7.9 years ago by 35k • written 7.9 years ago by ▴ 310
0
votes
0
replies
1.3k
views
Orthologs search in plant plastid genomes
genome gene blast alignment
8.0 years ago by Denis ▴ 310
0
votes
1
reply
5.9k
views
Comment: C: How to make ortholog table with Reciprocal Best Hit blast (Python?) ?
8.0 years ago by Denis ▴ 310
5
votes
2
replies
1.4k
views
A question about blast algorithm
alignment blast
updated 8.1 years ago by 5.8k • written 8.1 years ago by ▴ 310
1
vote
1
reply
1.4k
views
Metrics to compare different tools for PE reads merging
next-gen
8.7 years ago by Denis ▴ 310
0
votes
1
reply
1.9k
views
Comment: C: Most accurate way to measure adapters quantity in NGS illumina reads
8.7 years ago by Denis ▴ 310
1
vote
3
replies
1.9k
views
Most accurate way to measure adapters quantity in NGS illumina reads
next-gen
updated 8.7 years ago by ★ 2.5k • written 8.7 years ago by ▴ 310
0
votes
1
reply
3.7k
views
Comment: C: Cnv Analysis On Genes
10.0 years ago by Denis ▴ 310
146 results • Page 3 of 3
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