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5
votes
3
replies
9.1k
views
pybedtools.BedTool.intersect not working, install problem
pybedtools
updated 3.2 years ago by
Ram
45k • written 10.5 years ago by
juncheng
▴ 220
1
vote
0
replies
2.7k
views
Comment:
C: Select patients for cancer classifier
updated 5.3 years ago by
Ram
45k • written 10.9 years ago by
juncheng
▴ 220
0
votes
1
reply
4.5k
views
Comment:
C: Cancer subtypes classifier integrate microarray and rnaseq data
updated 5.3 years ago by
Ram
45k • written 10.9 years ago by
juncheng
▴ 220
0
votes
1
reply
3.7k
views
Comment:
Comment: Variance decomposition analysis (solved)
updated 3.2 years ago by
Ram
45k • written 10.5 years ago by
juncheng
▴ 220
6
votes
6
replies
2.9k
views
Efficient way to add annotation to a list of genome positions with python
genome
python
updated 3.3 years ago by
Ram
45k • written 10.7 years ago by
juncheng
▴ 220
6
votes
9
replies
9.8k
views
6 follow
Allele frequency of vcf file
SNP
updated 3.2 years ago by
steve
★ 3.5k • written 10.8 years ago by
juncheng
▴ 220
4
votes
8
replies
9.8k
views
Picard CollectRnaSeqMetrics error
RNA-Seq
updated 3.4 years ago by
Ram
45k • written 10.7 years ago by
juncheng
▴ 220
0
votes
1
reply
3.4k
views
Comment:
Comment: Bioinformatics Career plans and developments
updated 2.9 years ago by
Ram
45k • written 10.1 years ago by
juncheng
▴ 220
5
votes
3
replies
3.4k
views
Forum:
Bioinformatics Career plans and developments
career
updated 2.9 years ago by
Ram
45k • written 10.1 years ago by
juncheng
▴ 220
0
votes
0
replies
4.1k
views
Comment:
C: Replace me: bioinformatician/post-doc at the DZNE (Bonn, Germany)
10.1 years ago by
juncheng
▴ 220
1
vote
1
reply
5.4k
views
Count splice junction reads from SAM/BAM files
splice-junction
RNA-Seq
updated 2.9 years ago by
Ram
45k • written 10.1 years ago by
juncheng
▴ 220
0
votes
0
replies
3.2k
views
Answer:
A: CLIP-seq data process, start from sra file
10.3 years ago by
juncheng
▴ 220
1
vote
3
replies
3.0k
views
Do I need to sort the .bam file for SNP calling by samtools?
SNP
updated 10.3 years ago by
Biostar
20 • written 10.8 years ago by
juncheng
▴ 220
4
votes
14
replies
3.7k
views
Variance decomposition analysis (solved)
RNA-Seq
R
hypothesis-test
updated 3.2 years ago by
Ram
45k • written 10.5 years ago by
juncheng
▴ 220
0
votes
1
reply
3.7k
views
Comment:
Comment: Variance decomposition analysis (solved)
updated 3.2 years ago by
Ram
45k • written 10.5 years ago by
juncheng
▴ 220
0
votes
1
reply
3.7k
views
Comment:
C: Variance decomposition time series hypothesis testing
10.5 years ago by
juncheng
▴ 220
0
votes
0
replies
3.0k
views
Comment:
Comment: Ensembl 77 is out
updated 3.2 years ago by
Ram
45k • written 10.5 years ago by
juncheng
▴ 220
0
votes
0
replies
3.7k
views
Comment:
C: Variance decomposition time series hypothesis testing
10.5 years ago by
juncheng
▴ 220
0
votes
1
reply
3.7k
views
Comment:
Comment: Variance decomposition analysis (solved)
updated 3.2 years ago by
Ram
45k • written 10.5 years ago by
juncheng
▴ 220
0
votes
2
replies
3.7k
views
Comment:
C: Variance decomposition time series hypothesis testing
10.5 years ago by
juncheng
▴ 220
0
votes
1
reply
3.7k
views
Comment:
Comment: Variance decomposition analysis (solved)
updated 3.2 years ago by
Ram
45k • written 10.5 years ago by
juncheng
▴ 220
2
votes
6
replies
2.5k
views
what does CIGAR '22M2007N79M-61p82M19S' means?
ChIP-Seq
updated 3.3 years ago by
Ram
45k • written 10.6 years ago by
juncheng
▴ 220
0
votes
1
reply
2.5k
views
Answer:
Answer: what does CIGAR '22M2007N79M-61p82M19S' means?
updated 3.3 years ago by
Ram
45k • written 10.6 years ago by
juncheng
▴ 220
0
votes
0
replies
2.5k
views
Comment:
Comment: what does CIGAR '22M2007N79M-61p82M19S' means?
updated 3.3 years ago by
Ram
45k • written 10.6 years ago by
juncheng
▴ 220
0
votes
2
replies
3.1k
views
Comment:
C: Differential expressed gene analysis ---- to normalize the count data and fit in
10.6 years ago by
juncheng
▴ 220
2
votes
5
replies
3.1k
views
Differential expressed gene analysis ---- to normalize the count data and fit into a model
R
RNA-Seq
updated 3.3 years ago by
Ram
45k • written 10.6 years ago by
juncheng
▴ 220
9
votes
7
replies
6.0k
views
fisher test with multiple samples
statistics
updated 3.4 years ago by
Ram
45k • written 10.7 years ago by
juncheng
▴ 220
0
votes
0
replies
2.9k
views
Comment:
C: Efficient way to add annotation to a list of genome positions with python
10.7 years ago by
juncheng
▴ 220
0
votes
0
replies
2.9k
views
Comment:
C: Efficient way to add annotation to a list of genome positions with python
10.7 years ago by
juncheng
▴ 220
0
votes
0
replies
7.2k
views
Comment:
Comment: Get MW of a protein given a uniprot ID in R
updated 3.3 years ago by
Ram
45k • written 10.7 years ago by
juncheng
▴ 220
6
votes
9
replies
14k
views
awk select duplicated lines
awk
updated 3.3 years ago by
Ram
45k • written 10.7 years ago by
juncheng
▴ 220
0
votes
0
replies
14k
views
Answer:
Answer: awk select duplicated lines
updated 3.3 years ago by
Ram
45k • written 10.7 years ago by
juncheng
▴ 220
1
vote
0
replies
14k
views
Comment:
Comment: awk select duplicated lines
updated 3.3 years ago by
Ram
45k • written 10.7 years ago by
juncheng
▴ 220
0
votes
0
replies
14k
views
Comment:
Comment: awk select duplicated lines
updated 3.3 years ago by
Ram
45k • written 10.7 years ago by
juncheng
▴ 220
0
votes
0
replies
14k
views
Comment:
C: awk select duplicated lines
10.7 years ago by
juncheng
▴ 220
0
votes
0
replies
14k
views
Comment:
C: awk select duplicated lines
10.7 years ago by
juncheng
▴ 220
0
votes
1
reply
9.8k
views
Comment:
C: Picard CollectRnaSeqMetrics error
10.7 years ago by
juncheng
▴ 220
0
votes
0
replies
9.8k
views
Comment:
C: Picard CollectRnaSeqMetrics error
10.7 years ago by
juncheng
▴ 220
0
votes
2
replies
6.0k
views
Comment:
Comment: fisher test with multiple samples
updated 3.4 years ago by
Ram
45k • written 10.7 years ago by
juncheng
▴ 220
0
votes
1
reply
6.0k
views
Comment:
Comment: fisher test with multiple samples
updated 3.4 years ago by
Ram
45k • written 10.7 years ago by
juncheng
▴ 220
0
votes
0
replies
5.9k
views
Comment:
C: Reference sequence and gtf annotation.
10.8 years ago by
juncheng
▴ 220
0
votes
1
reply
5.9k
views
Comment:
C: Reference sequence and gtf annotation.
10.8 years ago by
juncheng
▴ 220
1
vote
5
replies
5.9k
views
Reference sequence and gtf annotation.
RNA-Seq
updated 3.4 years ago by
Ram
45k • written 10.8 years ago by
juncheng
▴ 220
0
votes
0
replies
5.9k
views
Answer:
A: Reference sequence and gtf annotation.
10.8 years ago by
juncheng
▴ 220
0
votes
0
replies
12k
views
Comment:
C: Map gene name to gene ID
10.8 years ago by
juncheng
▴ 220
0
votes
0
replies
12k
views
Answer:
Answer: Map gene name to gene ID
updated 3.2 years ago by
Ram
45k • written 10.8 years ago by
juncheng
▴ 220
5
votes
4
replies
4.1k
views
while read loop shell command
bash
updated 10.8 years ago by
Vivek
★ 2.7k • written 10.8 years ago by
juncheng
▴ 220
0
votes
0
replies
4.1k
views
Comment:
C: while read loop shell command
10.8 years ago by
juncheng
▴ 220
0
votes
0
replies
4.1k
views
Comment:
C: while read loop shell command
10.8 years ago by
juncheng
▴ 220
0
votes
0
replies
4.8k
views
Comment:
C: How to calculate allele specific expression from RNAseq data
10.8 years ago by
juncheng
▴ 220
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