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503
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Comment: Comment: STAR: Paired alignment gets ~18% unmapped (too short), but single reads get >90%
6 days ago by Trivas ★ 1.9k
2
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0
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439
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Answer: Answer: ChIP-Seq
8 weeks ago by Trivas ★ 1.9k
1
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0
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710
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Comment: Comment: RNA-Seq multiple lane
6 months ago by Trivas ★ 1.9k
1
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1
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710
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Answer: Answer: RNA-Seq multiple lane
6 months ago by Trivas ★ 1.9k
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1
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1.3k
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Comment: Comment: High Detection of Duplication in RNAseq dataset
6 months ago by Trivas ★ 1.9k
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1
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1.3k
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Comment: Comment: High Detection of Duplication in RNAseq dataset
6 months ago by Trivas ★ 1.9k
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0
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712
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Comment: Comment: Recommendations for performing Bulk RNA sequencing on non-model organism with po
7 months ago by Trivas ★ 1.9k
0
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1
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712
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Answer: Answer: Recommendations for performing Bulk RNA sequencing on non-model organism with po
7 months ago by Trivas ★ 1.9k
1
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0
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577
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Comment: Comment: How to Handle Unbalanced RNA-seq Data (710 vs. 15 Samples) Using DESeq2?
7 months ago by Trivas ★ 1.9k
0
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0
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578
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Answer: Answer: RNA-seq and Chip Seq alignment
7 months ago by Trivas ★ 1.9k
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1
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1.8k
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Comment: Comment: How to solve DESeq2 Error in checkFullRank(modelMatrix) cause by biological repl
7 months ago by Trivas ★ 1.9k
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1
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1.2k
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Comment: Comment: Downloading RNAseq datasets from GEO into R
7 months ago by Trivas ★ 1.9k
1
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1
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1.2k
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Answer: Answer: Downloading RNAseq datasets from GEO into R
7 months ago by Trivas ★ 1.9k
0
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1
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680
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Comment: Comment: Samtools flagstat output said there is zero paired-reads in scRNA-seq bam file
8 months ago by Trivas ★ 1.9k
1
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1
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1.7k
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Answer: Answer: How to assign the reassign the orientation of clusters in pheatmap
8 months ago by Trivas ★ 1.9k
1
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0
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974
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Comment: Comment: Volcano plot with different font size for gene labels
9 months ago by Trivas ★ 1.9k
0
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1
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1.3k
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Comment: Comment: Overlapping cut and tag H3k27 peaks and ATAC-Seq peaks
9 months ago by Trivas ★ 1.9k
0
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0
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974
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Comment: Comment: Volcano plot with different font size for gene labels
9 months ago by Trivas ★ 1.9k
0
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0
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777
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Answer: Answer: Detecting a virus in RNA-Seq Data
9 months ago by Trivas ★ 1.9k
0
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0
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692
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Comment: Comment: Filtering reads that map to both references
10 months ago by Trivas ★ 1.9k
2
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1
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727
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Answer: Answer: RSeQC : infer_experiment.py Error: Could not retrieve index file
10 months ago by Trivas ★ 1.9k
1
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1
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597
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Answer: Answer: Database for non cancer cell lines
12 months ago by Trivas ★ 1.9k
0
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0
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1.6k
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Answer: Answer: Single cell demultiplexing using 10x and TotalSeq-B
12 months ago by Trivas ★ 1.9k
2
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0
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1.8k
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Answer: Answer: Overriding a color palette in R to emphasize specific data points
12 months ago by Trivas ★ 1.9k
0
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1
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1.8k
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Comment: Comment: Import list and assign distinct colors in R
12 months ago by Trivas ★ 1.9k
0
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1
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1.8k
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Comment: Comment: Import list and assign distinct colors in R
12 months ago by Trivas ★ 1.9k
0
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2
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1.8k
views
Answer: Answer: Import list and assign distinct colors in R
12 months ago by Trivas ★ 1.9k
0
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1
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1.1k
views
Comment: Comment: UMI_extract for paired end reads of micro_RNA
12 months ago by Trivas ★ 1.9k
0
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0
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420
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Comment: Comment: How to perform enrichment p-value for a motif
12 months ago by Trivas ★ 1.9k
1
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1
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798
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Answer: Answer: How to extract unmapped reads to assemble a plasmid
13 months ago by Trivas ★ 1.9k
1
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0
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859
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Answer: Answer: installation of deepTools
13 months ago by Trivas ★ 1.9k
0
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1
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572
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Comment: Comment: Error Reading gencode.v38.genes.json.gz File in SvAnna CLI Tool
13 months ago by Trivas ★ 1.9k
2
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1
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595
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Answer: Answer: Read coverage bias
13 months ago by Trivas ★ 1.9k
0
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1
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1.2k
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Comment: Comment: Speeding up WGS analysis
13 months ago by Trivas ★ 1.9k
0
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1
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1.2k
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Comment: Comment: Speeding up WGS analysis
13 months ago by Trivas ★ 1.9k
0
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0
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1.2k
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Comment: Comment: Speeding up WGS analysis
13 months ago by Trivas ★ 1.9k
0
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8
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1.2k
views
Speeding up WGS analysis
WGS
updated 13 months ago by 150k • written 13 months ago by ★ 1.9k
1
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1
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676
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Comment: Comment: Absolute logfc and Pvalue for statstical calculation
14 months ago by Trivas ★ 1.9k
2
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1
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706
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Answer: Answer: sweepfinder2
14 months ago by Trivas ★ 1.9k
0
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0
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610
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Comment: Comment: HOMER Motif Analysis-- homer2 error
14 months ago by Trivas ★ 1.9k
0
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1
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1.1k
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Comment: Comment: Lollipop plot for genome-view genes and differential expressing visuallization
14 months ago by Trivas ★ 1.9k
0
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0
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708
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Comment: Comment: Trying to have just one legend for many pie charts
14 months ago by Trivas ★ 1.9k
0
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1
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708
views
Comment: Comment: Trying to have just one legend for many pie charts
14 months ago by Trivas ★ 1.9k
0
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0
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696
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Comment: Comment: homer findMotifsGenome.pl
14 months ago by Trivas ★ 1.9k
1
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0
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1.5k
views
Comment: Comment: DESeq2 heatmap with low baseMean values
14 months ago by Trivas ★ 1.9k
1
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1
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822
views
Answer: Answer: How to make the Input track flat for ChIP-seq
14 months ago by Trivas ★ 1.9k
1
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0
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1.1k
views
Comment: Comment: scatterplot with count numbers in ggscatter
15 months ago by Trivas ★ 1.9k
2
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0
replies
965
views
Comment: Comment: Doublechecking enrichment of promoters of DE genes
15 months ago by Trivas ★ 1.9k
0
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0
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530
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Answer: Answer: Help requiring DEXSeq in R
15 months ago by Trivas ★ 1.9k
0
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0
replies
656
views
Comment: Comment: Confusion about "Top Features table" in cellranger web summary output for CITE-S
15 months ago by Trivas ★ 1.9k
311 results • Page 1 of 7
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