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Answer: Answer: downstream analysis on the output of nf-core/rnaseq pipeline
11 months ago by Trivas ★ 1.8k
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Comment: Comment: Overlapping and merging ChIP-seq peaks
11 months ago by Trivas ★ 1.8k
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Comment: Comment: Psuedobulk analysis of single cell RNA-Seq data
11 months ago by Trivas ★ 1.8k
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1.0k
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Comment: Comment: Overlapping and merging ChIP-seq peaks
11 months ago by Trivas ★ 1.8k
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692
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Answer: Answer: how to remove multiple columns from a file in R
11 months ago by Trivas ★ 1.8k
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981
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Comment: Comment: Resolving over clustered NGS with Q-scores
11 months ago by Trivas ★ 1.8k
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981
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Answer: Answer: Resolving over clustered NGS with Q-scores
11 months ago by Trivas ★ 1.8k
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793
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Answer: Answer: How Can I move the scattered dots more closer into the center of box ?
12 months ago by Trivas ★ 1.8k
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737
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Answer: Answer: Running STAR on fastq file generated from a RNA-seq experiment
12 months ago by Trivas ★ 1.8k
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384
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Answer: Answer: miRNA annotation miRge3.0
12 months ago by Trivas ★ 1.8k
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1.8k
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Comment: Comment: STAR output
12 months ago by Trivas ★ 1.8k
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898
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Comment: Comment: Does DESeq2 correct for library size when importing the counts with DESeqDataSet
12 months ago by Trivas ★ 1.8k
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617
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Answer: Answer: how to fix low RNA input in bulk RNAseq data analysis?
12 months ago by Trivas ★ 1.8k
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502
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Comment: Comment: annotatePeak error for some problem
12 months ago by Trivas ★ 1.8k
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456
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Answer: Answer: It is valiable identify hubgenes of miRNAs target genes
13 months ago by Trivas ★ 1.8k
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494
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Comment: Comment: BrdU analysis of yeast replication
13 months ago by Trivas ★ 1.8k
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731
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Answer: Answer: should I use normalized counts or transformed of normalized counts for RNA-seq a
13 months ago by Trivas ★ 1.8k
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1.8k
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Comment: Comment: Providing multiple read files to Salmon
13 months ago by Trivas ★ 1.8k
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912
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Comment: Comment: Low Fraction Gene Expression Reads in Spots in Visium 10x Fresh Frozen experimen
13 months ago by Trivas ★ 1.8k
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676
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Comment: Comment: Fast QC results (per sequence GC content) - RNA seq
13 months ago by Trivas ★ 1.8k
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756
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Comment: Comment: Interpreting the CpG pearson correlation plot
13 months ago by Trivas ★ 1.8k
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2.7k
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Comment: Comment: STAR Genome index Error
13 months ago by Trivas ★ 1.8k
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2.7k
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Comment: Comment: STAR Genome index Error
13 months ago by Trivas ★ 1.8k
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931
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Answer: Answer: tximport error: vroom
13 months ago by Trivas ★ 1.8k
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818
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Answer: Answer: DEG gene list and find common TF from public ChlP-Seq data
14 months ago by Trivas ★ 1.8k
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888
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Answer: Answer: GOSt Plot
14 months ago by Trivas ★ 1.8k
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721
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Answer: Answer: How to import bigwig files into igvR
14 months ago by Trivas ★ 1.8k
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Comment: Comment: Subclustering of intergated cells from scRNA-seq data
14 months ago by Trivas ★ 1.8k
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611
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Answer: Answer: Is it possible to convert 3 prime sequencing read counts into TPMs?
14 months ago by Trivas ★ 1.8k
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1.8k
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Comment: Comment: Should I Learn Docker to Run Command Line Bioinformatics Tool?
14 months ago by Trivas ★ 1.8k
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829
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Comment: Comment: GO annotation in R using library(org.Hs.eg.db)
14 months ago by Trivas ★ 1.8k
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671
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Answer: Answer: Normalisation on subset of genes
14 months ago by Trivas ★ 1.8k
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2.3k
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Comment: Comment: bedops alternative for bedtools -unionbedg ?
15 months ago by Trivas ★ 1.8k
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909
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Comment: Comment: Heatmap ChIP-seq average signal
15 months ago by Trivas ★ 1.8k
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1.7k
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Comment: Comment: Identifying transcription factors for a list of genes
15 months ago by Trivas ★ 1.8k
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882
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Comment: Comment: Get the "average" of a column in a heatmap, combine 3 heatmaps into 1?
15 months ago by Trivas ★ 1.8k
2
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769
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Answer: Answer: What to do after importing quantification with tximport
15 months ago by Trivas ★ 1.8k
2
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0
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684
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Comment: Comment: How to add value of column to barchart on hover?
15 months ago by Trivas ★ 1.8k
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684
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Comment: Comment: How to add value of column to barchart on hover?
15 months ago by Trivas ★ 1.8k
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692
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Comment: Comment: Zero Mapping rate
15 months ago by Trivas ★ 1.8k
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2.1k
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Comment: Comment: Trimming of reads in miRNA-Seq data
15 months ago by Trivas ★ 1.8k
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2.1k
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Comment: Comment: Trimming of reads in miRNA-Seq data
15 months ago by Trivas ★ 1.8k
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4.1k
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Comment: Comment: Heatmap legend position change
15 months ago by Trivas ★ 1.8k
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3.0k
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Comment: Comment: What to do about "outlier" values in volcano plot?
16 months ago by Trivas ★ 1.8k
2
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2
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890
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Answer: Answer: how to run ROSE to find super enhnacers-
16 months ago by Trivas ★ 1.8k
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599
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Answer: Answer: W,M,R nucleotides
16 months ago by Trivas ★ 1.8k
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809
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Comment: Comment: How to Detect Presence of HPV-33 in Sample Data (FASTQ, BAM, VCF on GRCh37)
16 months ago by Trivas ★ 1.8k
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576
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Answer: Answer: Bowtie - multiple alignments and seed length vs read length in miRNA mapping
16 months ago by Trivas ★ 1.8k
2
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576
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Answer: Answer: Calculate TMB from BAM file
16 months ago by Trivas ★ 1.8k
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2
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1.4k
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Comment: Comment: Double biological replication when using DESeq2
16 months ago by Trivas ★ 1.8k
309 results • Page 2 of 7
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