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2
votes
1
reply
191
views
Help on encode accessions
encode
updated 5 weeks ago by 147k • written 5 weeks ago by ▴ 50
1
vote
1
reply
1.3k
views
Comment: Comment: ChIP seq peak annotation
23 months ago by tsomakiank ▴ 50
2
votes
3
replies
1.3k
views
ChIP seq peak annotation
Homer ChIP-seq annotatePeaks.pl
updated 20 months ago by 44k • written 23 months ago by ▴ 50
0
votes
0
replies
778
views
Comment: Comment: How annotation files are generated?
23 months ago by tsomakiank ▴ 50
0
votes
0
replies
778
views
Comment: Comment: How annotation files are generated?
23 months ago by tsomakiank ▴ 50
0
votes
4
replies
778
views
How annotation files are generated?
Gtf
23 months ago by tsomakiank ▴ 50
0
votes
0
replies
13k
views
Comment: Comment: Laptops for bioinformatics
2.1 years ago by tsomakiank ▴ 50
24
votes
20
replies
13k
views
11 follow
Laptops for bioinformatics
hardware Laptops
updated 17 months ago by 4.5k • written 2.1 years ago by ▴ 50
0
votes
1
reply
13k
views
Comment: Comment: Laptops for bioinformatics
2.1 years ago by tsomakiank ▴ 50
0
votes
1
reply
13k
views
Comment: Comment: Laptops for bioinformatics
2.1 years ago by tsomakiank ▴ 50
1
vote
1
reply
13k
views
Comment: Comment: Laptops for bioinformatics
2.1 years ago by tsomakiank ▴ 50
0
votes
0
replies
392
views
How to logarithmically combine chip seq peaks
log2 Chiseq
2.1 years ago by tsomakiank ▴ 50
10
votes
3
replies
10.0k
views
DESeq2 installation Error (ERROR: dependency ‘locfit’ is not available for package ‘DESeq2’)
DESeq2
updated 2.1 years ago by ▴ 40 • written 2.6 years ago by ▴ 50
0
votes
0
replies
1.0k
views
Comment: Comment: Change window size in wiggle file.
2.1 years ago by tsomakiank ▴ 50
0
votes
1
reply
1.0k
views
Comment: Comment: Change window size in wiggle file.
2.1 years ago by tsomakiank ▴ 50
0
votes
4
replies
1.0k
views
Change window size in wiggle file.
wiggle window_size
updated 2.1 years ago by ▴ 810 • written 2.1 years ago by ▴ 50
0
votes
0
replies
1.4k
views
Comment: Comment: ChIPQC error <<Unable to process. Each bam file must be associated with at most
2.1 years ago by tsomakiank ▴ 50
0
votes
0
replies
1.4k
views
Comment: Comment: ChIPQC error <<Unable to process. Each bam file must be associated with at most
2.1 years ago by tsomakiank ▴ 50
0
votes
1
reply
1.4k
views
Comment: Comment: ChIPQC error <<Unable to process. Each bam file must be associated with at most
2.1 years ago by tsomakiank ▴ 50
0
votes
5
replies
1.4k
views
ChIPQC error <<Unable to process. Each bam file must be associated with at most one peakset.>>
ChIPQC
2.1 years ago by tsomakiank ▴ 50
0
votes
1
reply
685
views
Irreproducibility Discovery Rate for broad histone marks.
chip-seq idr
updated 2.2 years ago by 4.0k • written 2.2 years ago by ▴ 50
19
votes
13
replies
3.2k
views
8 follow
Forum: Can bioinformatics Phds be completely or almost completely done remotely?
PhD
updated 2.2 years ago by 6.9k • written 2.2 years ago by ▴ 50
0
votes
1
reply
644
views
LSF scheduler download
LSF
updated 17 months ago by 44k • written 2.2 years ago by ▴ 50
0
votes
0
replies
530
views
ChIPQC Error
ChIP-seq ChIPQC
2.3 years ago by tsomakiank ▴ 50
0
votes
0
replies
988
views
Comment: Comment: Run LSF job locally.
2.4 years ago by tsomakiank ▴ 50
0
votes
0
replies
988
views
Comment: Comment: Run LSF job locally.
2.4 years ago by tsomakiank ▴ 50
0
votes
1
reply
988
views
Comment: Comment: Run LSF job locally.
2.4 years ago by tsomakiank ▴ 50
1
vote
6
replies
988
views
Run LSF job locally.
LSF
updated 17 months ago by 44k • written 2.4 years ago by ▴ 50
0
votes
0
replies
1.0k
views
Comment: Comment: 0 enriched terms found (Gene Ontology Analysis)
2.4 years ago by tsomakiank ▴ 50
0
votes
2
replies
1.0k
views
0 enriched terms found (Gene Ontology Analysis)
ClusterProfiler GeneOntology
2.4 years ago by tsomakiank ▴ 50
0
votes
0
replies
1.1k
views
Comment: Comment: Remove contamination reads from fastq files
2.5 years ago by tsomakiank ▴ 50
0
votes
1
reply
1.1k
views
Comment: Comment: Remove contamination reads from fastq files
2.5 years ago by tsomakiank ▴ 50
0
votes
4
replies
1.1k
views
Remove contamination reads from fastq files
contamination rna-seq
updated 17 months ago by 44k • written 2.5 years ago by ▴ 50
0
votes
0
replies
926
views
Comment: Comment: GENECODE gene annotation and ENSEMBL annotation analogy
2.6 years ago by tsomakiank ▴ 50
1
vote
2
replies
926
views
GENECODE gene annotation and ENSEMBL annotation analogy
ensembl gencode
2.6 years ago by tsomakiank ▴ 50
0
votes
0
replies
10.0k
views
Comment: Comment: DESeq2 installation Error (ERROR: dependency ‘locfit’ is not available for packa
2.6 years ago by tsomakiank ▴ 50
0
votes
0
replies
2.2k
views
Comment: Comment: Linux Terminal vs PyCharm Terminal
2.6 years ago by tsomakiank ▴ 50
4
votes
4
replies
2.2k
views
Linux Terminal vs PyCharm Terminal
Linux Terminal
updated 2.6 years ago by 147k • written 2.6 years ago by ▴ 50
0
votes
0
replies
2.2k
views
Comment: Comment: Linux Terminal vs PyCharm Terminal
2.6 years ago by tsomakiank ▴ 50
2
votes
4
replies
807
views
Question about analyzing data in high perforfmance computer.
hpc
updated 2.7 years ago by 44k • written 2.7 years ago by ▴ 50
0
votes
0
replies
807
views
Comment: Comment: Question about analyzing data in high perforfmance computer.
2.7 years ago by tsomakiank ▴ 50
0
votes
0
replies
695
views
Comment: Comment: Raw data clean up
2.7 years ago by tsomakiank ▴ 50
0
votes
2
replies
695
views
Raw data clean up
cleanup rawdata
2.7 years ago by tsomakiank ▴ 50
0
votes
0
replies
1.1k
views
Comment: Comment: Equipment for bioinformatics.
2.7 years ago by tsomakiank ▴ 50
3
votes
3
replies
1.1k
views
Equipment for bioinformatics.
hardware
updated 23 months ago by 44k • written 2.7 years ago by ▴ 50
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