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Comment: Comment: B6 variant vcf file
15 months ago by second_exon ▴ 210
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1.1k
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Comment: Comment: B6 variant vcf file
15 months ago by second_exon ▴ 210
1
vote
5
replies
1.1k
views
B6 variant vcf file
Mouse B6 vcf
15 months ago by second_exon ▴ 210
0
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1
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3.1k
views
Comment: C: how to trim multiple sequence alignmnet and de-aling the sequences?
updated 4.9 years ago by 44k • written 10.6 years ago by ▴ 210
6
votes
6
replies
1.7k
views
Filter sam/bam files
GBS sam bam filter samtools
updated 6.4 years ago by 14k • written 6.4 years ago by ▴ 210
1
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0
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1.7k
views
Comment: C: Filter sam/bam files
6.4 years ago by second_exon ▴ 210
0
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0
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1.7k
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Comment: C: Filter sam/bam files
6.4 years ago by second_exon ▴ 210
0
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0
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4.0k
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Comment: C: how to find genes based on SNP rsIDs
6.9 years ago by second_exon ▴ 210
1
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1
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1.3k
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Comment: C: allelic phylogenic clustrering or tree
6.9 years ago by second_exon ▴ 210
0
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1
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1.7k
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Comment: C: How to command python to continue beyond the loop?
6.9 years ago by second_exon ▴ 210
3
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1
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1.7k
views
Answer: A: Transform duplicate rows into columns.
7.0 years ago by second_exon ▴ 210
1
vote
4
replies
4.3k
views
How to differentiate Homozygous reference calls from No calls in VCF
snps samtools
updated 7.9 years ago by 147k • written 7.9 years ago by ▴ 210
0
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1
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4.3k
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Comment: C: How to differentiate Homozygous reference calls from No calls in VCF
7.9 years ago by second_exon ▴ 210
1
vote
4
replies
1.4k
views
How to call heterozygous SNPs
next-gen SNP GATK samtools
8.0 years ago by second_exon ▴ 210
0
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1
reply
2.0k
views
Comment: C: Find highly similar regions of specific lengths to a query in a genome
8.0 years ago by second_exon ▴ 210
8
votes
11
replies
8.6k
views
bio::db::sam installation error
bioperl samtools
updated 8.2 years ago by ★ 2.9k • written 8.2 years ago by ▴ 210
0
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0
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8.6k
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Comment: C: bio::db::sam installation error
8.2 years ago by second_exon ▴ 210
1
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0
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8.6k
views
Comment: C: bio::db::sam installation error
8.2 years ago by second_exon ▴ 210
0
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0
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8.6k
views
Comment: C: bio::db::sam installation error
8.2 years ago by second_exon ▴ 210
0
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2
replies
8.6k
views
Comment: C: bio::db::sam installation error
8.2 years ago by second_exon ▴ 210
0
votes
1
reply
5.1k
views
How/where to download Human recombination map/hotspots?
sequence human recombination
updated 8.2 years ago by ★ 1.9k • written 8.2 years ago by ▴ 210
0
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0
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1.9k
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Comment: C: parsing alignment file
8.2 years ago by second_exon ▴ 210
2
votes
0
replies
1.9k
views
Answer: A: parsing alignment file
8.2 years ago by second_exon ▴ 210
16
votes
4
replies
26k
views
High Scoring Pairs (HSP) in BLAST output
BLAST
updated 8.2 years ago by ★ 5.2k • written 8.2 years ago by ▴ 210
2
votes
0
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1.9k
views
Comment: C: comparison of divergence between different markers
8.2 years ago by second_exon ▴ 210
2
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1
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6.7k
views
Answer: A: python: Parsing fasta file
8.2 years ago by second_exon ▴ 210
1
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0
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4.8k
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Comment: C: CSV to JSON D3Js hierarchical flare.json can you help in Python
8.2 years ago by second_exon ▴ 210
0
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0
replies
1.8k
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Comment: C: Intermediate range calculation from files
8.2 years ago by second_exon ▴ 210
1
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2
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4.8k
views
Comment: C: CSV to JSON D3Js hierarchical flare.json can you help in Python
8.2 years ago by second_exon ▴ 210
0
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0
replies
1.4k
views
Answer: A: I have start and end position of sequences, want to remove redundancy
8.2 years ago by second_exon ▴ 210
2
votes
1
reply
1.9k
views
Answer: A: Parsing GLOBPROT flat text file format
8.2 years ago by second_exon ▴ 210
0
votes
5
replies
7.1k
views
Velvet: Segmentation fault (core dumped)
next-gen-sequencing Assembly velvet
updated 2.7 years ago by 44k • written 9.9 years ago by ▴ 210
0
votes
4
replies
3.1k
views
how to trim multiple sequence alignmnet and de-aling the sequences?
alignment sequence
updated 8.8 years ago by 20 • written 10.6 years ago by ▴ 210
0
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0
replies
1.6k
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Comment: C: subsetting sets of scaffolds based on sequence similarity
9.6 years ago by second_exon ▴ 210
0
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1
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1.6k
views
Comment: C: subsetting sets of scaffolds based on sequence similarity
9.6 years ago by second_exon ▴ 210
0
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4
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1.6k
views
subsetting sets of scaffolds based on sequence similarity
sam NGS bam Assembly
updated 21 months ago by 44k • written 9.6 years ago by ▴ 210
2
votes
5
replies
2.5k
views
7 follow
Better statergy for Gap Closing
NGS Assembly gap-closing
updated 2.4 years ago by 44k • written 9.6 years ago by ▴ 210
0
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0
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2.6k
views
Comment: C: Parse mapped scaffolds in BWA alignment
9.6 years ago by second_exon ▴ 210
2
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2
replies
2.6k
views
Parse mapped scaffolds in BWA alignment
SAM NGS BWA BAM
updated 2.4 years ago by 44k • written 9.6 years ago by ▴ 210
0
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0
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1.6k
views
Assembling Miseq reads based on BAC position
Assembly miseq BAC
9.8 years ago by second_exon ▴ 210
0
votes
0
replies
1.8k
views
Patchy alignment in bowtie
bowtie genome Assembly velvet
updated 3.6 years ago by 44k • written 9.9 years ago by ▴ 210
0
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1
reply
7.1k
views
Comment: Comment: Velvet: Segmentation fault (core dumped)
updated 2.7 years ago by 44k • written 9.9 years ago by ▴ 210
0
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0
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2.2k
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Comment: C: Is It Possible To Use Blast+ To Hit Embl Database?
10.6 years ago by second_exon ▴ 210
1
vote
3
replies
2.2k
views
Is It Possible To Use Blast+ To Hit Embl Database?
blast+
updated 10.6 years ago by ▴ 980 • written 10.6 years ago by ▴ 210
5
votes
1
reply
3.4k
views
How to subset a set of EST sequences in fasta file based on sequence ID or Name using R?
R EST subset
updated 10.6 years ago by 104k • written 10.6 years ago by ▴ 210
4
votes
3
replies
2.5k
views
How To Get Status Update In Ncbi Standalone Blast?
blast perl
updated 10.6 years ago by 11k • written 10.6 years ago by ▴ 210
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