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RSEM expression values
RSem Trinity
updated 19 months ago by 44k • written 19 months ago by • 0
0
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0
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359
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align_and_estimate_abundance.pl
trinityrnaseq expression-values
updated 20 months ago by 44k • written 22 months ago by • 0
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6.5k
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Comment: Comment: STRINGTIE WARNING: no reference transcripts were found for the genomic sequences
23 months ago by Roy.anupama11 • 0
0
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0
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382
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Heteroduplex identification
Heteroduplex loop identification
2.0 years ago by Roy.anupama11 • 0
0
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0
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379
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How does Indexing and de-novo identification and masking of repetitive elements occurs?
RepeatMasker RepeatModeler Indexing Index
2.3 years ago by Roy.anupama11 • 0
0
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1
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776
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Comment: Comment: Genome indexing
2.3 years ago by Roy.anupama11 • 0
0
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3
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776
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Genome indexing
genomeIndexing Indexing
updated 2.3 years ago by ▴ 810 • written 2.3 years ago by • 0
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0
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933
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Comment: Comment: FASTA sequence retrieval
2.4 years ago by Roy.anupama11 • 0
0
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1
reply
611
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What does different columns for merged gtf file represents?
StringTie GTF merged
updated 2.5 years ago by 4.5k • written 2.5 years ago by • 0
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0
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736
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Comment: Comment: FASTA sequences extraction
2.5 years ago by Roy.anupama11 • 0
2
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2
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736
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FASTA sequences extraction
FASTA sequences
2.5 years ago by Roy.anupama11 • 0
0
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4
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933
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FASTA sequence retrieval
FASTA Genes DEGs
2.4 years ago by Roy.anupama11 • 0
0
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3
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674
views
How to search and identify the function of DEGs
function functional annoatation DEGs
updated 2.5 years ago by ▴ 810 • written 2.5 years ago by • 0
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0
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373
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analyze_diff_expr.pl result explanation
Trinity analyze_diff_expr.pl UP.subset DEGs
2.5 years ago by Roy.anupama11 • 0
0
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0
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851
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Comment: Comment: Finding DEGs using script available in Trinity for RSEM
2.5 years ago by Roy.anupama11 • 0
0
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1
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851
views
Comment: Comment: Finding DEGs using script available in Trinity for RSEM
2.5 years ago by Roy.anupama11 • 0
0
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3
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851
views
Finding DEGs using script available in Trinity for RSEM
run_DE_analysis.pl Trinity RSEM DEGs
2.5 years ago by Roy.anupama11 • 0
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0
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2.2k
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Comment: Comment: Trinity run_DE_analysis samples.txt file format?
2.5 years ago by Roy.anupama11 • 0
0
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1
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758
views
Comment: Comment: Using RSem of Trinity, align_and_estimate_abundance.pl script, all folders for s
2.6 years ago by Roy.anupama11 • 0
0
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3
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758
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Using RSem of Trinity, align_and_estimate_abundance.pl script, all folders for sample/condition is not being created
RSem Quantification Trinity
updated 20 months ago by 44k • written 2.6 years ago by • 0
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0
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1.3k
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Comment: Comment: Finding DEGs from HISAT2/STRINGTIE output
2.6 years ago by Roy.anupama11 • 0
0
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1
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1.3k
views
Comment: Comment: Finding DEGs from HISAT2/STRINGTIE output
2.6 years ago by Roy.anupama11 • 0
0
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1
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1.3k
views
Comment: Comment: Finding DEGs from HISAT2/STRINGTIE output
2.6 years ago by Roy.anupama11 • 0
0
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6
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1.3k
views
Finding DEGs from HISAT2/STRINGTIE output
EdgeR pipeline BowTie Kallisto RSem DEGs
2.6 years ago by Roy.anupama11 • 0
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