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9
votes
0
replies
10.0k
views
Answer: A: Sort Multiple Fasta Numerically
updated 4.1 years ago by 87k • written 13.0 years ago by 33k
57
votes
42
replies
8.0k
views
12 follow
Forum: Why is academic software hard to install?
software-installation
updated 3.2 years ago by 45k • written 10.5 years ago by 33k
2
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0
replies
74k
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Comment: C: What Are The Most Common Stupid Mistakes In Bioinformatics?
updated 4.8 years ago by 45k • written 12.4 years ago by 33k
0
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1
reply
74k
views
Comment: C: What Are The Most Common Stupid Mistakes In Bioinformatics?
updated 4.8 years ago by 45k • written 12.4 years ago by 33k
7
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0
replies
74k
views
Comment: C: What Are The Most Common Stupid Mistakes In Bioinformatics?
updated 4.8 years ago by 45k • written 11.9 years ago by 33k
5
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0
replies
74k
views
Comment: C: What Are The Most Common Stupid Mistakes In Bioinformatics?
updated 4.8 years ago by 45k • written 12.9 years ago by 33k
3
votes
1
reply
4.6k
views
Comment: C: weld (former brew) - yet another fastq utility
updated 5.2 years ago by 45k • written 9.1 years ago by 33k
7
votes
6
replies
19k
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Answer: Answer: Choosing Random Set Of Seqs From Larger Set
updated 2.9 years ago by 45k • written 13.0 years ago by 33k
4
votes
0
replies
12k
views
Answer: A: parse large vcf file?
updated 5.2 years ago by 45k • written 10.9 years ago by 33k
2
votes
1
reply
4.0k
views
Answer: A: BWA and SOAP2 cannot map a particular sequence which exists in the genome
updated 5.3 years ago by 45k • written 10.9 years ago by 33k
54
votes
11
replies
66k
views
Answer: A: How To Efficiently Parse A Huge Fastq File?
updated 5.3 years ago by 45k • written 13.6 years ago by 33k
1
vote
2
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12k
views
Comment: C: Extracting subset of records from FASTA/FASTQ files based on exact/pattern match
updated 5.3 years ago by 45k • written 10.9 years ago by 33k
2
votes
1
reply
12k
views
Comment: C: Extracting subset of records from FASTA/FASTQ files based on exact/pattern match
updated 5.3 years ago by 45k • written 11.0 years ago by 33k
3
votes
1
reply
22k
views
Answer: A: Vcf Sort According To Order Of The Reference File
updated 5.3 years ago by 45k • written 11.4 years ago by 33k
0
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0
replies
15k
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Comment: C: Fastq Quality Control And Reporting - Aka Fastqc Versus The New Contenders
updated 5.3 years ago by 45k • written 12.1 years ago by 33k
1
vote
1
reply
15k
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Comment: C: Fastq Quality Control And Reporting - Aka Fastqc Versus The New Contenders
updated 5.3 years ago by 45k • written 12.1 years ago by 33k
9
votes
1
reply
150k
views
Answer: A: Gnu Parallel - Parallelize Serial Command Line Programs Without Changing Them
updated 5.3 years ago by 45k • written 12.1 years ago by 33k
4
votes
0
replies
8.0k
views
Answer: A: How To Get Fasta Format Using Fastafrombed Or How To Turn Linearized Fasta To Th
updated 5.3 years ago by 45k • written 12.2 years ago by 33k
14
votes
1
reply
19k
views
Answer: A: GFA to Fasta file
updated 5.3 years ago by 45k • written 9.3 years ago by 33k
7
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1
reply
8.2k
views
Answer: A: Samtofastq: Net.Sf.Picard.Picardexception: "Found N Unpaired Mates "
updated 5.3 years ago by 45k • written 12.0 years ago by 33k
0
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0
replies
27k
views
Comment: C: Efficiently Iterating Over Fastq Records From Python
updated 5.3 years ago by 45k • written 13.3 years ago by 33k
0
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0
replies
66k
views
Comment: C: How To Sort Bed Format File
updated 5.3 years ago by 45k • written 12.1 years ago by 33k
10
votes
1
reply
66k
views
Answer: A: How To Sort Bed Format File
updated 5.3 years ago by 45k • written 12.1 years ago by 33k
0
votes
0
replies
12k
views
Comment: C: Low Support Value Of Phylogenetic Trees
updated 5.3 years ago by 45k • written 13.4 years ago by 33k
6
votes
1
reply
6.1k
views
Answer: A: Lack of consensus between NGS & Sanger sequencing on indels/mutations
updated 5.3 years ago by 45k • written 9.4 years ago by 33k
3
votes
0
replies
6.3k
views
Answer: A: Extract Flanking Region Of A Snp
updated 5.3 years ago by 45k • written 13.6 years ago by 33k
4
votes
0
replies
11k
views
Answer: A: Insert Length Vs Nominal Length For Paired-End Data
updated 5.3 years ago by 45k • written 13.5 years ago by 33k
25
votes
6
replies
4.9k
views
Answer: A: Does Pre-Publishing Open Source Algorithms Hurt Chances Of Getting Published?
updated 5.3 years ago by 45k • written 13.6 years ago by 33k
4
votes
14
replies
8.9k
views
Answer: A: Dbsnp Individual Genotyping Information For Specific Snps
updated 5.3 years ago by 45k • written 14.0 years ago by 33k
3
votes
1
reply
12k
views
Answer: A: DNA composition - all k-mers and their frequency in some sequencing data
updated 5.3 years ago by 45k • written 9.4 years ago by 33k
1
vote
1
reply
12k
views
Comment: C: DNA composition - all k-mers and their frequency in some sequencing data
updated 5.3 years ago by 45k • written 9.4 years ago by 33k
1
vote
1
reply
12k
views
Comment: C: DNA composition - all k-mers and their frequency in some sequencing data
updated 5.3 years ago by 45k • written 9.4 years ago by 33k
2
votes
1
reply
2.8k
views
Answer: A: How to parse genebank file using swift for OSX ?
updated 5.4 years ago by 45k • written 9.4 years ago by 33k
10
votes
1
reply
5.0k
views
Answer: A: Why aren't Hamiltonian paths used in genome assembly?
updated 5.4 years ago by 45k • written 9.6 years ago by 33k
0
votes
1
reply
7.1k
views
Comment: C: Perl6 and the Future of Bioinformatics - Compatibility and Integration
updated 5.4 years ago by 45k • written 9.6 years ago by 33k
0
votes
1
reply
4.6k
views
Comment: Comment: New versions of Minia and DSK (2.0.x)
updated 3.0 years ago by 45k • written 10.1 years ago by 33k
1
vote
0
replies
7.1k
views
Comment: C: need to separate read1 and read2 to run tophat2
updated 5.5 years ago by 45k • written 10.3 years ago by 33k
28
votes
3
replies
34k
views
Answer: A: Why are we still using Bam files? And not Cram, HDF5 or improved Bam files?
updated 5.5 years ago by 45k • written 10.7 years ago by 33k
0
votes
0
replies
9.3k
views
Comment: C: Not having root access sucks; installing software without root privileges
updated 5.5 years ago by 45k • written 10.8 years ago by 33k
0
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0
replies
2.9k
views
Comment: C: How to make Bowtie 2 align the following reads as pairs?
updated 5.5 years ago by 45k • written 10.8 years ago by 33k
1
vote
1
reply
12k
views
Comment: C: Bowtie Vs Bwa For Indels
updated 5.5 years ago by 45k • written 11.0 years ago by 33k
7
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0
replies
12k
views
Answer: A: Bowtie Vs Bwa For Indels
updated 5.5 years ago by 45k • written 11.0 years ago by 33k
1
vote
0
replies
11k
views
Comment: C: Compare A Denovo Assembly To The Reference Genome
updated 5.5 years ago by 45k • written 11.3 years ago by 33k
2
votes
2
replies
11k
views
Answer: A: Compare A Denovo Assembly To The Reference Genome
updated 5.5 years ago by 45k • written 11.3 years ago by 33k
2
votes
0
replies
4.3k
views
Comment: C: How To Detect Chimeric Single End Reads With Galaxy?
updated 5.5 years ago by 45k • written 11.8 years ago by 33k
1
vote
0
replies
4.3k
views
Comment: C: How To Detect Chimeric Single End Reads With Galaxy?
updated 5.5 years ago by 45k • written 11.8 years ago by 33k
5
votes
1
reply
4.3k
views
Answer: A: Are Some Sequences Uniquely Mapped By Bwa When Mapped As Paired-End That Would N
updated 5.5 years ago by 45k • written 11.9 years ago by 33k
2
votes
1
reply
5.9k
views
Answer: A: Local Alignment Of Short Reads: Mosaik, Bowtie2, Bwa?
updated 5.5 years ago by 45k • written 11.9 years ago by 33k
6
votes
0
replies
8.9k
views
Answer: A: Distributed Computing In Bioinformatics
updated 5.5 years ago by 45k • written 12.0 years ago by 33k
3
votes
0
replies
15k
views
Comment: C: How To Align The Reference Sequence With The Contigs ?
updated 5.5 years ago by 45k • written 12.0 years ago by 33k
1,458 results • Page 1 of 30
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