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3
votes
2
replies
4.2k
views
Comment: C: Are these false somatic variants? Visual inspection with IGV
7.6 years ago by lh3 33k
1
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1
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3.7k
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Comment: C: Variant annotation and filtration server ALAPY Genome Explorer (AGx)
7.6 years ago by lh3 33k
2
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1
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5.5k
views
Answer: A: Software for Tree Visualization
7.6 years ago by lh3 33k
1
vote
1
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7.2k
views
Comment: C: BWA: Why paired reads mapped to different chromosome?
7.6 years ago by lh3 33k
1
vote
1
reply
5.1k
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Comment: C: picard MarkDuplicates find EOF problem
7.6 years ago by lh3 33k
1
vote
1
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5.1k
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Comment: C: picard MarkDuplicates find EOF problem
7.6 years ago by lh3 33k
2
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0
replies
16k
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Comment: C: NGS files' shrinkage software: ALAPY Compressor, only fastq files so far =)
7.6 years ago by lh3 33k
2
votes
0
replies
16k
views
Comment: C: NGS files' shrinkage software: ALAPY Compressor, only fastq files so far =)
7.6 years ago by lh3 33k
1
vote
0
replies
2.0k
views
Comment: C: BAM to fast[aq] while retaining alignment?
7.6 years ago by lh3 33k
1
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1
reply
4.0k
views
Comment: C: editing phylogeny tree
7.6 years ago by lh3 33k
0
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0
replies
2.0k
views
Comment: C: Free space hosting online database
7.6 years ago by lh3 33k
9
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0
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7.1k
views
Answer: A: Good practices while dealing with very large datasets
7.6 years ago by lh3 33k
1
vote
1
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3.4k
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Comment: C: how to estimate mean and standard deviation read depth for all the variants?
7.6 years ago by lh3 33k
3
votes
0
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4.0k
views
Comment: C: How to filter huge VCF files for datamining?
7.6 years ago by lh3 33k
1
vote
1
reply
3.4k
views
Comment: C: how to estimate mean and standard deviation read depth for all the variants?
7.6 years ago by lh3 33k
1
vote
0
replies
1.8k
views
Comment: C: Using different quality thresholds for trimming and filtering reads
7.6 years ago by lh3 33k
1
vote
1
reply
3.9k
views
Comment: C: Using tabix remotely against S3
7.6 years ago by lh3 33k
1
vote
1
reply
2.7k
views
Comment: C: Chromosome Y imputation, any good reference panels?
7.6 years ago by lh3 33k
3
votes
1
reply
24k
views
Comment: C: What is the definition of "read depth" vs "coverage"? (again...)
7.6 years ago by lh3 33k
0
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0
replies
1.7k
views
Comment: C: Some regions of the genome are not covered by DNA-Seq
7.6 years ago by lh3 33k
0
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0
replies
16k
views
Comment: C: NGS files' shrinkage software: ALAPY Compressor, only fastq files so far =)
7.6 years ago by lh3 33k
1
vote
1
reply
2.7k
views
Comment: C: how I can use z-score to decide if the results from viterbi are significant or
7.6 years ago by lh3 33k
9
votes
1
reply
10k
views
Answer: A: SRR/ERR/DRR prefixes in SRA - What's the difference?
7.6 years ago by lh3 33k
2
votes
1
reply
16k
views
Comment: C: NGS files' shrinkage software: ALAPY Compressor, only fastq files so far =)
7.7 years ago by lh3 33k
2
votes
1
reply
16k
views
Comment: C: NGS files' shrinkage software: ALAPY Compressor, only fastq files so far =)
7.7 years ago by lh3 33k
6
votes
2
replies
16k
views
Answer: A: NGS files' shrinkage software: ALAPY Compressor, only fastq files so far =)
7.7 years ago by lh3 33k
4
votes
1
reply
16k
views
Comment: C: NGS files' shrinkage software: ALAPY Compressor, only fastq files so far =)
7.7 years ago by lh3 33k
9
votes
0
replies
8.3k
views
Answer: A: BWA mem output inconsistent on same but re-ordered FASTQ input
7.8 years ago by lh3 33k
2
votes
0
replies
3.2k
views
Comment: C: Can't import HTSeq module in python promt
8.0 years ago by lh3 33k
1
vote
1
reply
1.8k
views
Comment: C: How to retrieve BAM file from NCBI SRA
8.0 years ago by lh3 33k
2
votes
1
reply
35k
views
Comment: C: Introducing Clumpify: Create 30% Smaller, Faster Gzipped Fastq Files
8.0 years ago by lh3 33k
1
vote
0
replies
2.2k
views
Comment: C: Why annotations are not encoded using standard informatic format ?
8.0 years ago by lh3 33k
1
vote
0
replies
2.2k
views
Comment: C: Why annotations are not encoded using standard informatic format ?
8.0 years ago by lh3 33k
1
vote
1
reply
2.2k
views
Answer: A: Why annotations are not encoded using standard informatic format ?
8.0 years ago by lh3 33k
0
votes
0
replies
10k
views
Comment: C: How do people know to use at least 30X coverage in WGS?
8.1 years ago by lh3 33k
0
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0
replies
3.6k
views
Comment: C: Why is this insertion detected by NGS a false positive ?
8.1 years ago by lh3 33k
0
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1
reply
2.0k
views
Comment: C: is there an Mappers/aligners working on adam sequencing data
8.2 years ago by lh3 33k
4
votes
0
replies
3.8k
views
Answer: A: Should I perform an error correction for an assembly ?
8.2 years ago by lh3 33k
3
votes
0
replies
2.0k
views
Comment: C: Why less number of hadoop/spark based de novo assemblers?
8.2 years ago by lh3 33k
1
vote
0
replies
19k
views
Answer: A: How to calculate TPM?
8.2 years ago by lh3 33k
1
vote
1
reply
7.4k
views
Comment: C: MutScan: Detect important mutations by scanning FastQ files directly
8.2 years ago by lh3 33k
0
votes
0
replies
6.2k
views
Comment: C: Use samtools to access bam file in aws s3 storage
8.2 years ago by lh3 33k
0
votes
0
replies
38k
views
Comment: C: Trimming adapter sequences - is it necessary?
8.2 years ago by lh3 33k
2
votes
0
replies
38k
views
Comment: C: Trimming adapter sequences - is it necessary?
8.2 years ago by lh3 33k
1
vote
1
reply
38k
views
Comment: C: Trimming adapter sequences - is it necessary?
8.2 years ago by lh3 33k
1
vote
1
reply
7.2k
views
Comment: C: I am really pissed off by the bioinformatics software world. Do/can we have a be
8.3 years ago by lh3 33k
1
vote
0
replies
7.2k
views
Comment: C: I am really pissed off by the bioinformatics software world. Do/can we have a be
8.3 years ago by lh3 33k
4
votes
0
replies
7.2k
views
Comment: C: I am really pissed off by the bioinformatics software world. Do/can we have a be
8.3 years ago by lh3 33k
0
votes
0
replies
3.4k
views
Comment: C: Can FM Index be built in linear time?
8.3 years ago by lh3 33k
8
votes
2
replies
3.4k
views
Answer: A: Can FM Index be built in linear time?
8.3 years ago by lh3 33k
1,458 results • Page 3 of 30
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