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0
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781
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ArchR Doublet Inference to Signac
Signac scATAC-seq ArchR
updated 9 months ago by ★ 1.7k • written 22 months ago by ▴ 20
0
votes
1
reply
779
views
Error in H5Fopen
atac-seq scatac-seq
updated 13 months ago by • 0 • written 2.5 years ago by ▴ 20
0
votes
0
replies
404
views
Performing GO analysis from Differential Peaks
clusterProfiler Signac analysis atac-seq go
20 months ago by bioinformatics.girl ▴ 20
0
votes
1
reply
531
views
Please help with edgeR script
edgeR
updated 20 months ago by ★ 1.8k • written 20 months ago by ▴ 20
0
votes
0
replies
505
views
Too many differential peaks derived from FindMarkers() [Signac]
Signac ATAC scATAC-seq
20 months ago by bioinformatics.girl ▴ 20
3
votes
5
replies
5.4k
views
edgeR, Pseudobulk scRNA-seq
seurat scrna-seq edgeR
updated 20 months ago by ★ 7.7k • written 20 months ago by ▴ 20
0
votes
1
reply
1.3k
views
Comment: Comment: Remove string from Seurat object metadata
20 months ago by bioinformatics.girl ▴ 20
0
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0
replies
1.3k
views
Comment: Comment: Remove string from Seurat object metadata
20 months ago by bioinformatics.girl ▴ 20
0
votes
4
replies
1.3k
views
Remove string from Seurat object metadata
seurat scrna
updated 20 months ago by 4.1k • written 20 months ago by ▴ 20
0
votes
1
reply
1.3k
views
Comment: Comment: PSEUDOBULK HELP-DE Expression in scRNA-seq
20 months ago by bioinformatics.girl ▴ 20
1
vote
3
replies
1.3k
views
PSEUDOBULK HELP-DE Expression in scRNA-seq
scRNA-seq seurat
updated 20 months ago by ★ 1.8k • written 20 months ago by ▴ 20
0
votes
1
reply
719
views
Remove string from Seurat Object
scRNA seurat
updated 20 months ago by ★ 1.7k • written 20 months ago by ▴ 20
0
votes
0
replies
498
views
Seurat Object Manipulation
seurat scATAC signac
20 months ago by bioinformatics.girl ▴ 20
0
votes
0
replies
382
views
Subsetting ATAC dataset
DARs scATAC-seq scATAC
20 months ago by bioinformatics.girl ▴ 20
0
votes
0
replies
491
views
scATAC integration
scatac-seq integration
updated 21 months ago by 148k • written 21 months ago by ▴ 20
0
votes
1
reply
656
views
ATAC Integration Help
scatac-seq integration atac-seq
updated 21 months ago by ▴ 50 • written 21 months ago by ▴ 20
0
votes
1
reply
1.5k
views
Comment: Comment: Seurat Metadata to Dataframe Manipulation
22 months ago by bioinformatics.girl ▴ 20
0
votes
3
replies
1.5k
views
Seurat Metadata to Dataframe Manipulation
rstudio seurat scrna-seq
updated 22 months ago by ▴ 430 • written 22 months ago by ▴ 20
1
vote
2
replies
1.1k
views
MACS to Signac
scatac-seq
updated 22 months ago by 86k • written 22 months ago by ▴ 20
1
vote
1
reply
703
views
MACS Error
scatac-seq peak-calling Macs
updated 22 months ago by 44k • written 22 months ago by ▴ 20
1
vote
8
replies
4.2k
views
R Columns to Seurat Object
seurat scrna-seq
updated 22 months ago by • 0 • written 23 months ago by ▴ 20
0
votes
1
reply
915
views
Comment: Comment: scATAC-seq workflow
23 months ago by bioinformatics.girl ▴ 20
0
votes
3
replies
915
views
scATAC-seq workflow
Signac scATAC-seq
updated 13 days ago by • 0 • written 23 months ago by ▴ 20
0
votes
1
reply
2.4k
views
Comment: Comment: CoveragePlot in Signac from MACS2 Object
23 months ago by bioinformatics.girl ▴ 20
0
votes
1
reply
2.4k
views
Comment: Comment: CoveragePlot in Signac from MACS2 Object
23 months ago by bioinformatics.girl ▴ 20
0
votes
0
replies
413
views
scATAC merging of files
Signac scATAC-seq
23 months ago by bioinformatics.girl ▴ 20
0
votes
1
reply
2.4k
views
Comment: Comment: CoveragePlot in Signac from MACS2 Object
23 months ago by bioinformatics.girl ▴ 20
0
votes
7
replies
2.4k
views
CoveragePlot in Signac from MACS2 Object
Signac scATAC-seq
updated 23 months ago by 11k • written 23 months ago by ▴ 20
0
votes
1
reply
474
views
SetAllIdents and Idents function not found
scrna-seq
updated 23 months ago by ★ 28k • written 23 months ago by ▴ 20
0
votes
1
reply
4.2k
views
Comment: Comment: R Columns to Seurat Object
23 months ago by bioinformatics.girl ▴ 20
0
votes
1
reply
4.2k
views
Comment: Comment: R Columns to Seurat Object
23 months ago by bioinformatics.girl ▴ 20
0
votes
1
reply
4.2k
views
Comment: Comment: R Columns to Seurat Object
23 months ago by bioinformatics.girl ▴ 20
0
votes
0
replies
2.0k
views
Comment: Comment: UMAP Cluster separation
23 months ago by bioinformatics.girl ▴ 20
2
votes
5
replies
2.0k
views
UMAP Cluster separation
seurat ggplot umap scrna-seq
23 months ago by bioinformatics.girl ▴ 20
0
votes
1
reply
2.0k
views
Comment: Comment: UMAP Cluster separation
23 months ago by bioinformatics.girl ▴ 20
0
votes
0
replies
790
views
Comment: Comment: Fisher Exact Test against two Seurat Objects
23 months ago by bioinformatics.girl ▴ 20
0
votes
2
replies
790
views
Fisher Exact Test against two Seurat Objects
superexacttest fisher seurat scrna-seq
23 months ago by bioinformatics.girl ▴ 20
0
votes
1
reply
1.9k
views
Comment: Comment: Error in Seurat ScaleData() function
23 months ago by bioinformatics.girl ▴ 20
2
votes
6
replies
1.9k
views
Error in Seurat ScaleData() function
seurat scrna-seq snrna-seq
updated 23 months ago by 148k • written 23 months ago by ▴ 20
0
votes
1
reply
1.9k
views
Comment: Comment: Error in Seurat ScaleData() function
23 months ago by bioinformatics.girl ▴ 20
0
votes
0
replies
2.8k
views
Comment: Comment: UMAP labeling manipulation
24 months ago by bioinformatics.girl ▴ 20
0
votes
3
replies
2.8k
views
UMAP labeling manipulation
scrna-seq seurat umap
24 months ago by bioinformatics.girl ▴ 20
0
votes
1
reply
1.2k
views
Error with Tabix file
Signac atac atac-seq
updated 2.0 years ago by 164k • written 2.0 years ago by ▴ 20
0
votes
0
replies
875
views
Comment: Comment: Why can't I quantify the peaks (scATAC)?
2.1 years ago by bioinformatics.girl ▴ 20
0
votes
2
replies
875
views
Why can't I quantify the peaks (scATAC)?
Signac ATAC snATAC scATAC
2.1 years ago by bioinformatics.girl ▴ 20
0
votes
0
replies
376
views
CellBender vs CellRanger
snrna-seq
2.2 years ago by bioinformatics.girl ▴ 20
0
votes
0
replies
685
views
Comment: Comment: When to merge scRNA datasets
2.2 years ago by bioinformatics.girl ▴ 20
0
votes
2
replies
685
views
When to merge scRNA datasets
scRNA-seq scRNA seurat
2.2 years ago by bioinformatics.girl ▴ 20
1
vote
2
replies
770
views
.BAM to .BED to Coverage Plots
scATAC-seq Macs scatac signac
2.2 years ago by bioinformatics.girl ▴ 20
0
votes
0
replies
770
views
Comment: Comment: .BAM to .BED to Coverage Plots
2.2 years ago by bioinformatics.girl ▴ 20
81 results • Page 1 of 2
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