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0
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787
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Comment:
Comment: How to remove rows with empty gene symbols from a seurat object?
3 months ago by
Chris
▴ 360
2
votes
3
replies
787
views
How to remove rows with empty gene symbols from a seurat object?
seurat
updated 3 months ago by
Michael
55k • written 3 months ago by
Chris
▴ 360
0
votes
0
replies
310
views
Your suggestion how to annotate cell type from visium data
spatial-transcriptomics
7 months ago by
Chris
▴ 360
0
votes
0
replies
5.6k
views
Comment:
Comment: Clustering in single cell
7 months ago by
Chris
▴ 360
0
votes
0
replies
1.4k
views
Comment:
Comment: Help with subset seurat object by a column in metadata
8 months ago by
Chris
▴ 360
0
votes
0
replies
1.4k
views
Comment:
Comment: Help with subset seurat object by a column in metadata
8 months ago by
Chris
▴ 360
1
vote
4
replies
1.4k
views
Help with subset seurat object by a column in metadata
seurat
8 months ago by
Chris
▴ 360
0
votes
0
replies
371
views
Gene-pathway network with FDR or p value
clusterprofiler
10 months ago by
Chris
▴ 360
1
vote
0
replies
1.8k
views
Comment:
Comment: Can't increase font size for x axis
11 months ago by
Chris
▴ 360
1
vote
2
replies
1.8k
views
Comment:
Comment: Can't increase font size for x axis
11 months ago by
Chris
▴ 360
0
votes
0
replies
1.8k
views
Comment:
Comment: Can't increase font size for x axis
11 months ago by
Chris
▴ 360
0
votes
1
reply
1.8k
views
Comment:
Comment: Can't increase font size for x axi
11 months ago by
Chris
▴ 360
0
votes
1
reply
1.8k
views
Comment:
Comment: Can't increase font size for x axi
11 months ago by
Chris
▴ 360
11
votes
11
replies
1.8k
views
Can't increase font size for x axis
R
ggplot2
11 months ago by
Chris
▴ 360
0
votes
0
replies
747
views
Comment:
Comment: Help with cnet plot for customize pathway from MSigDb
11 months ago by
Chris
▴ 360
0
votes
2
replies
747
views
Help with cnet plot for customize pathway from MSigDb
cnet
11 months ago by
Chris
▴ 360
1
vote
1
reply
1.3k
views
Comment:
Comment: Help with running egsea()
13 months ago by
Chris
▴ 360
1
vote
1
reply
1.3k
views
Comment:
Comment: Help with running egsea()
13 months ago by
Chris
▴ 360
5
votes
5
replies
1.3k
views
Error in dimnames(x) <- dn : length of 'dimnames' [2] not equal to array extent
EGSEA
13 months ago by
Chris
▴ 360
0
votes
0
replies
429
views
Empty table plot using plotGseaTable()
FGSEA
13 months ago by
Chris
▴ 360
0
votes
0
replies
411
views
Filter low express genes in microarray data
microarray
13 months ago by
Chris
▴ 360
1
vote
1
reply
794
views
Difference when using difference number of pathways score to compare between 3 groups
GSVA
Limma
updated 14 months ago by
Gordon Smyth
★ 8.1k • written 14 months ago by
Chris
▴ 360
0
votes
0
replies
395
views
How to annotate pairwise p value from limma (3 groups) in a combine multiple boxplot?
limma
boxplot
14 months ago by
Chris
▴ 360
0
votes
1
reply
893
views
Comment:
Comment: Visualize pathways from MSigDB
14 months ago by
Chris
▴ 360
3
votes
3
replies
893
views
Visualize pathways from MSigDB
MSigdb
14 months ago by
Chris
▴ 360
0
votes
0
replies
317
views
How to check if a few pathways have relationship?
MSigdb
REACTOME
KEGG
14 months ago by
Chris
▴ 360
0
votes
0
replies
897
views
Comment:
Comment: Limma compare between 3 conditions vs 2 conditions
14 months ago by
Chris
▴ 360
0
votes
0
replies
340
views
Number of pathway result from GSVA
GSVA
14 months ago by
Chris
▴ 360
1
vote
3
replies
897
views
Limma compare between 3 conditions vs 2 conditions
Limma
updated 14 months ago by
Gordon Smyth
★ 8.1k • written 14 months ago by
Chris
▴ 360
1
vote
1
reply
1.1k
views
Help with SCENIC+
scenic-plus
updated 15 months ago by
corbettberry
▴ 10 • written 20 months ago by
Chris
▴ 360
0
votes
0
replies
1.3k
views
Comment:
Comment: Differential express genes in imbalance groups
15 months ago by
Chris
▴ 360
0
votes
0
replies
1.3k
views
Comment:
Comment: Differential express genes in imbalance groups
15 months ago by
Chris
▴ 360
4
votes
5
replies
1.3k
views
Differential express genes in imbalance groups
Limma
15 months ago by
Chris
▴ 360
0
votes
0
replies
608
views
Comment:
Comment: Upset plot
15 months ago by
Chris
▴ 360
1
vote
2
replies
608
views
Upset plot
upsetplot
15 months ago by
Chris
▴ 360
0
votes
0
replies
633
views
Comment:
Comment: How to get genes in a gene set in msigdb?
15 months ago by
Chris
▴ 360
0
votes
2
replies
633
views
How to get genes in a gene set in msigdb?
msigdb
14 months ago by
Chris
▴ 360
0
votes
0
replies
344
views
Function normalize raw microarray data for GSVA
gsva
15 months ago by
Chris
▴ 360
0
votes
0
replies
713
views
Error in validObject(.Object) : invalid class “ExpressionSet” object: sampleNames differ between assayData and phenoData
GSVA
15 months ago by
Chris
▴ 360
0
votes
1
reply
963
views
Comment:
Comment: Differential expression at pathway level
16 months ago by
Chris
▴ 360
1
vote
0
replies
963
views
Comment:
Comment: Differential expression at pathway level
16 months ago by
Chris
▴ 360
5
votes
4
replies
963
views
Differential expression at pathway level
GSVA
updated 16 months ago by
AquaDeath
▴ 80 • written 16 months ago by
Chris
▴ 360
0
votes
1
reply
1.8k
views
Comment:
Comment: Remove X in row name with only number
16 months ago by
Chris
▴ 360
0
votes
1
reply
1.8k
views
Comment:
Comment: Remove X in row name with only number
16 months ago by
Chris
▴ 360
0
votes
1
reply
1.8k
views
Comment:
Comment: Remove X in row name with only number
16 months ago by
Chris
▴ 360
7
votes
12
replies
3.1k
views
Integrated genes from bulk RNA seq and ATAC seq
ATAC-seq
bulk-RNA
updated 16 months ago by
Ram
45k • written 2.1 years ago by
Chris
▴ 360
0
votes
1
reply
1.8k
views
Comment:
Comment: Remove X in row name with only number
16 months ago by
Chris
▴ 360
0
votes
1
reply
1.8k
views
Comment:
Comment: Remove X in row name with only number
16 months ago by
Chris
▴ 360
4
votes
11
replies
1.8k
views
Remove X in row name with only number
GSVA
updated 16 months ago by
Ram
45k • written 16 months ago by
Chris
▴ 360
0
votes
1
reply
3.1k
views
Comment:
Comment: Help with gatk BaseRecalibrator
18 months ago by
Chris
▴ 360
513 results • Page
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