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comments
0
votes
0
replies
145
views
Your suggestion how to annotate cell type from visium data
spatial-transcriptomics
26 days ago by
Chris
▴ 340
0
votes
0
replies
3.6k
views
Comment:
Comment: Clustering in single cell
4 weeks ago by
Chris
▴ 340
0
votes
0
replies
607
views
Comment:
Comment: Help with subset seurat object by a column in metadata
6 weeks ago by
Chris
▴ 340
0
votes
0
replies
607
views
Comment:
Comment: Help with subset seurat object by a column in metadata
7 weeks ago by
Chris
▴ 340
1
vote
4
replies
607
views
Help with subset seurat object by a column in metadata
seurat
6 weeks ago by
Chris
▴ 340
0
votes
0
replies
235
views
Gene-pathway network with FDR or p value
clusterprofiler
4 months ago by
Chris
▴ 340
1
vote
0
replies
829
views
Comment:
Comment: Can't increase font size for x axis
4 months ago by
Chris
▴ 340
1
vote
2
replies
829
views
Comment:
Comment: Can't increase font size for x axis
4 months ago by
Chris
▴ 340
0
votes
0
replies
829
views
Comment:
Comment: Can't increase font size for x axis
4 months ago by
Chris
▴ 340
0
votes
1
reply
829
views
Comment:
Comment: Can't increase font size for x axi
4 months ago by
Chris
▴ 340
0
votes
1
reply
829
views
Comment:
Comment: Can't increase font size for x axi
4 months ago by
Chris
▴ 340
11
votes
11
replies
829
views
Can't increase font size for x axis
R
ggplot2
4 months ago by
Chris
▴ 340
0
votes
0
replies
397
views
Comment:
Comment: Help with cnet plot for customize pathway from MSigDb
4 months ago by
Chris
▴ 340
0
votes
2
replies
397
views
Help with cnet plot for customize pathway from MSigDb
cnet
4 months ago by
Chris
▴ 340
1
vote
1
reply
768
views
Comment:
Comment: Help with running egsea()
6 months ago by
Chris
▴ 340
1
vote
1
reply
768
views
Comment:
Comment: Help with running egsea()
6 months ago by
Chris
▴ 340
5
votes
5
replies
768
views
Error in dimnames(x) <- dn : length of 'dimnames' [2] not equal to array extent
EGSEA
6 months ago by
Chris
▴ 340
0
votes
0
replies
255
views
Empty table plot using plotGseaTable()
FGSEA
6 months ago by
Chris
▴ 340
0
votes
0
replies
237
views
Filter low express genes in microarray data
microarray
7 months ago by
Chris
▴ 340
1
vote
1
reply
589
views
Difference when using difference number of pathways score to compare between 3 groups
GSVA
Limma
updated 7 months ago by
Gordon Smyth
★ 7.7k • written 7 months ago by
Chris
▴ 340
0
votes
0
replies
227
views
How to annotate pairwise p value from limma (3 groups) in a combine multiple boxplot?
limma
boxplot
7 months ago by
Chris
▴ 340
0
votes
1
reply
557
views
Comment:
Comment: Visualize pathways from MSigDB
7 months ago by
Chris
▴ 340
3
votes
3
replies
557
views
Visualize pathways from MSigDB
MSigdb
7 months ago by
Chris
▴ 340
0
votes
0
replies
204
views
How to check if a few pathways have relationship?
MSigdb
REACTOME
KEGG
8 months ago by
Chris
▴ 340
0
votes
0
replies
590
views
Comment:
Comment: Limma compare between 3 conditions vs 2 conditions
8 months ago by
Chris
▴ 340
0
votes
0
replies
200
views
Number of pathway result from GSVA
GSVA
7 months ago by
Chris
▴ 340
1
vote
3
replies
590
views
Limma compare between 3 conditions vs 2 conditions
Limma
updated 7 months ago by
Gordon Smyth
★ 7.7k • written 8 months ago by
Chris
▴ 340
1
vote
1
reply
717
views
Help with SCENIC+
scenic-plus
updated 8 months ago by
corbettberry
▴ 10 • written 13 months ago by
Chris
▴ 340
0
votes
0
replies
779
views
Comment:
Comment: Differential express genes in imbalance groups
8 months ago by
Chris
▴ 340
0
votes
0
replies
779
views
Comment:
Comment: Differential express genes in imbalance groups
8 months ago by
Chris
▴ 340
4
votes
5
replies
779
views
Differential express genes in imbalance groups
Limma
8 months ago by
Chris
▴ 340
0
votes
0
replies
388
views
Comment:
Comment: Upset plot
8 months ago by
Chris
▴ 340
1
vote
2
replies
388
views
Upset plot
upsetplot
8 months ago by
Chris
▴ 340
0
votes
0
replies
405
views
Comment:
Comment: How to get genes in a gene set in msigdb?
8 months ago by
Chris
▴ 340
0
votes
2
replies
405
views
How to get genes in a gene set in msigdb?
msigdb
7 months ago by
Chris
▴ 340
0
votes
0
replies
231
views
Function normalize raw microarray data for GSVA
gsva
8 months ago by
Chris
▴ 340
0
votes
0
replies
520
views
Error in validObject(.Object) : invalid class “ExpressionSet” object: sampleNames differ between assayData and phenoData
GSVA
8 months ago by
Chris
▴ 340
0
votes
1
reply
642
views
Comment:
Comment: Differential expression at pathway level
9 months ago by
Chris
▴ 340
1
vote
0
replies
642
views
Comment:
Comment: Differential expression at pathway level
9 months ago by
Chris
▴ 340
5
votes
4
replies
642
views
Differential expression at pathway level
GSVA
updated 9 months ago by
AquaDeath
▴ 80 • written 9 months ago by
Chris
▴ 340
0
votes
1
reply
1.1k
views
Comment:
Comment: Remove X in row name with only number
9 months ago by
Chris
▴ 340
0
votes
1
reply
1.1k
views
Comment:
Comment: Remove X in row name with only number
9 months ago by
Chris
▴ 340
0
votes
1
reply
1.1k
views
Comment:
Comment: Remove X in row name with only number
9 months ago by
Chris
▴ 340
7
votes
12
replies
2.4k
views
Integrated genes from bulk RNA seq and ATAC seq
ATAC-seq
bulk-RNA
updated 9 months ago by
Ram
44k • written 18 months ago by
Chris
▴ 340
0
votes
1
reply
1.1k
views
Comment:
Comment: Remove X in row name with only number
9 months ago by
Chris
▴ 340
0
votes
1
reply
1.1k
views
Comment:
Comment: Remove X in row name with only number
9 months ago by
Chris
▴ 340
4
votes
11
replies
1.1k
views
Remove X in row name with only number
GSVA
updated 9 months ago by
Ram
44k • written 9 months ago by
Chris
▴ 340
0
votes
1
reply
2.0k
views
Comment:
Comment: Help with gatk BaseRecalibrator
11 months ago by
Chris
▴ 340
0
votes
1
reply
2.0k
views
Comment:
Comment: Help with gatk BaseRecalibrator
11 months ago by
Chris
▴ 340
0
votes
1
reply
2.0k
views
Comment:
Comment: Help with gatk BaseRecalibrator
11 months ago by
Chris
▴ 340
511 results • Page
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