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2
votes
1
reply
357
views
Enrichr : how to provide background ?
Enrichr
updated 3 months ago by 147k • written 3 months ago by ▴ 30
1
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0
replies
1.8k
views
Comment: Comment: Alternative splicing events
5 months ago by Sara ▴ 30
0
votes
0
replies
727
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Comment: Comment: How to add Ensembl ids after Pseudobulk analysis by DESeq2
5 months ago by Sara ▴ 30
0
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1
reply
727
views
Comment: Comment: How to add Ensembl ids after Pseudobulk analysis by DESeq2
6 months ago by Sara ▴ 30
0
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5
replies
727
views
How to add Ensembl ids after Pseudobulk analysis by DESeq2
Seurat Pseudobulk single-cell DESeq2 scRNA
5 months ago by Sara ▴ 30
0
votes
1
reply
850
views
Comment: Comment: How to calculate cell type frequency between two groups in single cell data
6 months ago by Sara ▴ 30
1
vote
4
replies
850
views
How to calculate cell type frequency between two groups in single cell data
Seurat single-cell sc-RNA cell-type
updated 5 months ago by ▴ 20 • written 6 months ago by ▴ 30
0
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0
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4.2k
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Comment: Comment: How to interpret DEXseq results in therms of significance
6 months ago by Sara ▴ 30
0
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0
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215
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How should I handle read counts derived from SGSeq when I want to build DEXSeqDataSet object
DEXSeq DEXSeqDataSet SGSeq
6 months ago by Sara ▴ 30
1
vote
3
replies
964
views
pheatmap
pheatmap heatmap differential-expression RNA-seq
updated 13 months ago by ★ 3.0k • written 13 months ago by ▴ 30
0
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0
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964
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Comment: Comment: pheatmap
13 months ago by Sara ▴ 30
0
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0
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1.5k
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Comment: Comment: How to get normalized counts corrected for variables in the design matrix of DES
15 months ago by Sara ▴ 30
3
votes
3
replies
1.5k
views
How to get normalized counts corrected for variables in the design matrix of DESeq2 as an input for WGCNA
WGCNA vst DESeq2
15 months ago by Sara ▴ 30
0
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0
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413
views
minModuleSize WGCNA
WGCNA minModuleSize
16 months ago by Sara ▴ 30
0
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0
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1.2k
views
Comment: Comment: Analize RNA-seq data using Hisat2
17 months ago by Sara ▴ 30
1
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0
replies
3.2k
views
Comment: Comment: samtools collate
17 months ago by Sara ▴ 30
6
votes
16
replies
3.2k
views
samtools collate
samtools
17 months ago by Sara ▴ 30
1
vote
2
replies
3.2k
views
Answer: Answer: samtools collate
17 months ago by Sara ▴ 30
0
votes
2
replies
3.2k
views
Comment: Comment: samtools collate
17 months ago by Sara ▴ 30
0
votes
1
reply
3.2k
views
Comment: Comment: samtools collate
17 months ago by Sara ▴ 30
0
votes
0
replies
3.2k
views
Comment: Comment: samtools collate
17 months ago by Sara ▴ 30
0
votes
1
reply
3.2k
views
Comment: Comment: samtools collate
17 months ago by Sara ▴ 30
0
votes
0
replies
1.4k
views
Comment: Comment: Losing a lot of significant genes after removing outliers. Having cell type comp
17 months ago by Sara ▴ 30
4
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5
replies
1.4k
views
Losing a lot of significant genes after removing outliers. Having cell type composition as covariates
DESeq2 RNA-seq
17 months ago by Sara ▴ 30
0
votes
1
reply
1.4k
views
Comment: Comment: Losing a lot of significant genes after removing outliers. Having cell type comp
17 months ago by Sara ▴ 30
8
votes
3
replies
1.2k
views
extreme high log2FoldChange in DESeq2 result
log2FoldChange DESeq2 RNA-seq DGEA
updated 17 months ago by 4.5k • written 17 months ago by ▴ 30
0
votes
0
replies
52k
views
Comment: Comment: Tool To Find Out If Fastq Is In Sanger Or Phred64 Encoding?
18 months ago by Sara ▴ 30
1
vote
1
reply
767
views
Differentially expressed gene with high log2foldchange by DESeq2; but not meaningful at the individual level
DESeq2 RNA-seq DGEA
17 months ago by Sara ▴ 30
8
votes
6
replies
1.3k
views
No differentially expressed genes after multiple testing correction in mice
edgeR DESeq2 Limma mouse RNA-seq
updated 18 months ago by 11k • written 18 months ago by ▴ 30
0
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0
replies
1.3k
views
Comment: Comment: No differentially expressed genes after multiple testing correction in mice
18 months ago by Sara ▴ 30
0
votes
2
replies
1.3k
views
Comment: Comment: No differentially expressed genes after multiple testing correction in mice
18 months ago by Sara ▴ 30
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