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0
votes
0
replies
130
views
Amplifying more then 6 subpools in an oligopool
wet-lab
9 days ago by
gernophil
▴ 90
0
votes
0
replies
135
views
Easy way to annotate CDSs in GFF3 with HGNC gene symbol (and transcript name?)
GFF3
GTF
18 days ago by
gernophil
▴ 90
0
votes
1
reply
161
views
Alternative to BLAST with N and mismatches as input
BLAST
updated 15 days ago by
lieven.sterck
15k • written 23 days ago by
gernophil
▴ 90
0
votes
1
reply
393
views
Comment:
Comment: Has this sequence really more then 70k perfect matches in the human genome?
24 days ago by
gernophil
▴ 90
0
votes
6
replies
393
views
Has this sequence really more then 70k perfect matches in the human genome?
BLAST
updated 24 days ago by
i.sudbery
20k • written 25 days ago by
gernophil
▴ 90
0
votes
1
reply
393
views
Comment:
Comment: Has this sequence really more then 70k perfect matches in the human genome?
25 days ago by
gernophil
▴ 90
0
votes
1
reply
393
views
Comment:
Comment: Has this sequence really more then 70k perfect matches in the human genome?
25 days ago by
gernophil
▴ 90
0
votes
0
replies
384
views
Answer:
Answer: How can I Obtain hg38 cancer mutation and variation files
11 weeks ago by
gernophil
▴ 90
0
votes
1
reply
284
views
Generating a Python parsable local db from dbSNP
Python
updated 12 weeks ago by
raphael.B
▴ 520 • written 12 weeks ago by
gernophil
▴ 90
0
votes
0
replies
1.2k
views
Comment:
Comment: Is there a way to install Python version 2 on Mac with M3 chips?
4 months ago by
gernophil
▴ 90
0
votes
0
replies
209
views
Reference panel of normals for ensembl named refgenome
Mutect2
6 months ago by
gernophil
▴ 90
0
votes
1
reply
2.9k
views
Comment:
Comment: Extract gRNA sequence using cutadapt
6 months ago by
gernophil
▴ 90
0
votes
1
reply
2.9k
views
Comment:
Comment: Extract gRNA sequence using cutadapt
6 months ago by
gernophil
▴ 90
0
votes
1
reply
2.9k
views
Comment:
Comment: Extract gRNA sequence using cutadapt
6 months ago by
gernophil
▴ 90
0
votes
1
reply
2.9k
views
Comment:
Comment: Extract gRNA sequence using cutadapt
6 months ago by
gernophil
▴ 90
0
votes
1
reply
1.5k
views
Comment:
Comment: Why multiple SYMBOLS, Consequences... for Variant Effect Predictor (VEP)
8 months ago by
gernophil
▴ 90
0
votes
1
reply
1.5k
views
Comment:
Comment: Why multiple SYMBOLS, Consequences... for Variant Effect Predictor (VEP)
8 months ago by
gernophil
▴ 90
0
votes
0
replies
1.1k
views
Comment:
Comment: BWA MEM different synthax on linux (bash) and macOS (zsh)
8 months ago by
gernophil
▴ 90
0
votes
1
reply
1.1k
views
Comment:
Comment: BWA MEM different synthax on linux (bash) and macOS (zsh)
8 months ago by
gernophil
▴ 90
0
votes
1
reply
1.1k
views
Comment:
Comment: BWA MEM different synthax on linux (bash) and macOS (zsh)
8 months ago by
gernophil
▴ 90
0
votes
0
replies
1.1k
views
Comment:
Comment: BWA MEM different synthax on linux (bash) and macOS (zsh)
8 months ago by
gernophil
▴ 90
0
votes
1
reply
1.1k
views
Comment:
Comment: BWA MEM different synthax on linux (bash) and macOS (zsh)
8 months ago by
gernophil
▴ 90
0
votes
0
replies
1.1k
views
Comment:
Comment: BWA MEM different synthax on linux (bash) and macOS (zsh)
8 months ago by
gernophil
▴ 90
0
votes
12
replies
1.1k
views
BWA MEM different synthax on linux (bash) and macOS (zsh)
MEM
BWA
8 months ago by
gernophil
▴ 90
0
votes
0
replies
239
views
Tutorial for COSMIC? Any way to calculate VAF?
COSMIC
8 months ago by
gernophil
▴ 90
0
votes
0
replies
648
views
Comment:
Comment: Would a string composed of `#CHROM`, `POS`, `REF` and `ALT` uniquely identify a
9 months ago by
gernophil
▴ 90
3
votes
3
replies
648
views
Would a string composed of `#CHROM`, `POS`, `REF` and `ALT` uniquely identify a variant?
VCF
updated 8 months ago by
LauferVA
4.5k • written 9 months ago by
gernophil
▴ 90
0
votes
0
replies
772
views
Comment:
Comment: Packages don't update, but no error or warning is thrown
9 months ago by
gernophil
▴ 90
0
votes
1
reply
772
views
Comment:
Comment: Bioconductor packages don't update without an error
9 months ago by
gernophil
▴ 90
0
votes
4
replies
772
views
Packages don't update, but no error or warning is thrown
Bioconductor
9 months ago by
gernophil
▴ 90
0
votes
1
reply
581
views
Comment:
Comment: VEP - select consequences version
9 months ago by
gernophil
▴ 90
0
votes
0
replies
9.2k
views
Comment:
Comment: fasterq-dump quit with error code 3
10 months ago by
gernophil
▴ 90
2
votes
3
replies
581
views
VEP - select consequences version
VEP
updated 9 months ago by
GenoMax
147k • written 10 months ago by
gernophil
▴ 90
0
votes
0
replies
31k
views
Comment:
Comment: Amino Acid Change To Genomic Location
10 months ago by
gernophil
▴ 90
0
votes
1
reply
814
views
Comment:
Comment: Is the USCS hg38.chromAlias.txt file availble in a sorted fashion?
11 months ago by
gernophil
▴ 90
0
votes
0
replies
814
views
Comment:
Comment: Is the USCS hg38.chromAlias.txt file availble in a sorted fashion?
updated 11 months ago by
Ram
44k • written 11 months ago by
gernophil
▴ 90
2
votes
5
replies
814
views
Is the USCS hg38.chromAlias.txt file availble in a sorted fashion?
chromnames
updated 11 months ago by
Ram
44k • written 11 months ago by
gernophil
▴ 90
0
votes
0
replies
2.1k
views
Comment:
Comment: Problem with Mamba
11 months ago by
gernophil
▴ 90
0
votes
1
reply
2.1k
views
Comment:
Comment: Problem with Mamba
11 months ago by
gernophil
▴ 90
1
vote
1
reply
2.1k
views
Comment:
Comment: Problem with Mamba
11 months ago by
gernophil
▴ 90
1
vote
1
reply
1.8k
views
Comment:
Comment: extract sequence from genome by region
11 months ago by
gernophil
▴ 90
0
votes
0
replies
1.8k
views
Comment:
Comment: extract sequence from genome by region
11 months ago by
gernophil
▴ 90
0
votes
1
reply
675
views
Comment:
Comment: keep read association with mpileup
11 months ago by
gernophil
▴ 90
0
votes
1
reply
1.8k
views
Comment:
Comment: extract sequence from genome by region
11 months ago by
gernophil
▴ 90
0
votes
1
reply
675
views
Comment:
Comment: keep read association with mpileup
11 months ago by
gernophil
▴ 90
0
votes
1
reply
1.8k
views
Comment:
Comment: extract sequence from genome by region
11 months ago by
gernophil
▴ 90
1
vote
4
replies
675
views
keep read association with mpileup
mpileup
samtools
updated 11 months ago by
Ram
44k • written 11 months ago by
gernophil
▴ 90
0
votes
1
reply
1.8k
views
Comment:
Comment: extract sequence from genome by region
11 months ago by
gernophil
▴ 90
0
votes
0
replies
1.8k
views
Comment:
Comment: extract sequence from genome by region
11 months ago by
gernophil
▴ 90
0
votes
1
reply
1.8k
views
Comment:
Comment: extract sequence from genome by region
11 months ago by
gernophil
▴ 90
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