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106
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Reference panel of normals for ensembl named refgenome
Mutect2
7 days ago by
gernophil
▴ 80
0
votes
1
reply
2.5k
views
Comment:
Comment: Extract gRNA sequence using cutadapt
18 days ago by
gernophil
▴ 80
0
votes
1
reply
2.5k
views
Comment:
Comment: Extract gRNA sequence using cutadapt
18 days ago by
gernophil
▴ 80
0
votes
1
reply
2.5k
views
Comment:
Comment: Extract gRNA sequence using cutadapt
18 days ago by
gernophil
▴ 80
0
votes
1
reply
2.5k
views
Comment:
Comment: Extract gRNA sequence using cutadapt
18 days ago by
gernophil
▴ 80
0
votes
1
reply
1.1k
views
Comment:
Comment: Why multiple SYMBOLS, Consequences... for Variant Effect Predictor (VEP)
7 weeks ago by
gernophil
▴ 80
0
votes
1
reply
1.1k
views
Comment:
Comment: Why multiple SYMBOLS, Consequences... for Variant Effect Predictor (VEP)
8 weeks ago by
gernophil
▴ 80
0
votes
0
replies
702
views
Comment:
Comment: BWA MEM different synthax on linux (bash) and macOS (zsh)
10 weeks ago by
gernophil
▴ 80
0
votes
1
reply
702
views
Comment:
Comment: BWA MEM different synthax on linux (bash) and macOS (zsh)
10 weeks ago by
gernophil
▴ 80
0
votes
1
reply
702
views
Comment:
Comment: BWA MEM different synthax on linux (bash) and macOS (zsh)
10 weeks ago by
gernophil
▴ 80
0
votes
0
replies
702
views
Comment:
Comment: BWA MEM different synthax on linux (bash) and macOS (zsh)
10 weeks ago by
gernophil
▴ 80
0
votes
1
reply
702
views
Comment:
Comment: BWA MEM different synthax on linux (bash) and macOS (zsh)
10 weeks ago by
gernophil
▴ 80
0
votes
0
replies
702
views
Comment:
Comment: BWA MEM different synthax on linux (bash) and macOS (zsh)
10 weeks ago by
gernophil
▴ 80
0
votes
12
replies
702
views
BWA MEM different synthax on linux (bash) and macOS (zsh)
MEM
BWA
10 weeks ago by
gernophil
▴ 80
0
votes
0
replies
145
views
Tutorial for COSMIC? Any way to calculate VAF?
COSMIC
11 weeks ago by
gernophil
▴ 80
0
votes
0
replies
430
views
Comment:
Comment: Would a string composed of `#CHROM`, `POS`, `REF` and `ALT` uniquely identify a
12 weeks ago by
gernophil
▴ 80
3
votes
3
replies
430
views
Would a string composed of `#CHROM`, `POS`, `REF` and `ALT` uniquely identify a variant?
VCF
updated 12 weeks ago by
LauferVA
4.2k • written 12 weeks ago by
gernophil
▴ 80
0
votes
0
replies
464
views
Comment:
Comment: Packages don't update, but no error or warning is thrown
3 months ago by
gernophil
▴ 80
0
votes
1
reply
464
views
Comment:
Comment: Bioconductor packages don't update without an error
3 months ago by
gernophil
▴ 80
0
votes
4
replies
464
views
Packages don't update, but no error or warning is thrown
Bioconductor
3 months ago by
gernophil
▴ 80
0
votes
1
reply
431
views
Comment:
Comment: VEP - select consequences version
3 months ago by
gernophil
▴ 80
0
votes
0
replies
6.4k
views
Comment:
Comment: fasterq-dump quit with error code 3
4 months ago by
gernophil
▴ 80
2
votes
3
replies
431
views
VEP - select consequences version
VEP
updated 3 months ago by
GenoMax
142k • written 4 months ago by
gernophil
▴ 80
0
votes
0
replies
30k
views
Comment:
Comment: Amino Acid Change To Genomic Location
4 months ago by
gernophil
▴ 80
0
votes
1
reply
639
views
Comment:
Comment: Is the USCS hg38.chromAlias.txt file availble in a sorted fashion?
5 months ago by
gernophil
▴ 80
0
votes
0
replies
639
views
Comment:
Comment: Is the USCS hg38.chromAlias.txt file availble in a sorted fashion?
updated 5 months ago by
Ram
43k • written 5 months ago by
gernophil
▴ 80
2
votes
5
replies
639
views
Is the USCS hg38.chromAlias.txt file availble in a sorted fashion?
chromnames
updated 5 months ago by
Ram
43k • written 5 months ago by
gernophil
▴ 80
0
votes
0
replies
1.3k
views
Comment:
Comment: Problem with Mamba
5 months ago by
gernophil
▴ 80
0
votes
1
reply
1.3k
views
Comment:
Comment: Problem with Mamba
5 months ago by
gernophil
▴ 80
1
vote
1
reply
1.3k
views
Comment:
Comment: Problem with Mamba
5 months ago by
gernophil
▴ 80
1
vote
1
reply
1.3k
views
Comment:
Comment: extract sequence from genome by region
5 months ago by
gernophil
▴ 80
0
votes
0
replies
1.3k
views
Comment:
Comment: extract sequence from genome by region
5 months ago by
gernophil
▴ 80
0
votes
1
reply
495
views
Comment:
Comment: keep read association with mpileup
5 months ago by
gernophil
▴ 80
0
votes
1
reply
1.3k
views
Comment:
Comment: extract sequence from genome by region
5 months ago by
gernophil
▴ 80
0
votes
1
reply
495
views
Comment:
Comment: keep read association with mpileup
5 months ago by
gernophil
▴ 80
0
votes
1
reply
1.3k
views
Comment:
Comment: extract sequence from genome by region
5 months ago by
gernophil
▴ 80
1
vote
4
replies
495
views
keep read association with mpileup
mpileup
samtools
updated 5 months ago by
Ram
43k • written 5 months ago by
gernophil
▴ 80
0
votes
1
reply
1.3k
views
Comment:
Comment: extract sequence from genome by region
5 months ago by
gernophil
▴ 80
0
votes
0
replies
1.3k
views
Comment:
Comment: extract sequence from genome by region
5 months ago by
gernophil
▴ 80
0
votes
1
reply
1.3k
views
Comment:
Comment: extract sequence from genome by region
5 months ago by
gernophil
▴ 80
3
votes
19
replies
1.3k
views
extract sequence from genome by region
fasta
updated 5 months ago by
Ram
43k • written 5 months ago by
gernophil
▴ 80
2
votes
3
replies
1.1k
views
Extracting exons using GenomicFeatures is different from manual extraction
R
GenomicFeatures
updated 6 months ago by
alejandrogzi
▴ 120 • written 11 months ago by
gernophil
▴ 80
1
vote
1
reply
616
views
CHOPCHOP command line
sgRNA
chopchop
updated 9 months ago by
GenoMax
142k • written 14 months ago by
gernophil
▴ 80
0
votes
0
replies
34k
views
Comment:
Comment: Extract Total Non-Overlapping Exon Length Per Gene With Bioconductor
10 months ago by
gernophil
▴ 80
0
votes
0
replies
1.1k
views
Comment:
Comment: Why did GENCODE change the main annotation file from Comprehensive to Basic
10 months ago by
gernophil
▴ 80
0
votes
1
reply
1.1k
views
Comment:
Comment: Why did GENCODE change the main annotation file from Comprehensive to Basic
10 months ago by
gernophil
▴ 80
0
votes
1
reply
1.1k
views
Comment:
Comment: Why did GENCODE change the main annotation file from Comprehensive to Basic
10 months ago by
gernophil
▴ 80
0
votes
1
reply
1.1k
views
Comment:
Comment: Why did GENCODE change the main annotation file from Comprehensive to Basic
10 months ago by
gernophil
▴ 80
0
votes
8
replies
1.1k
views
Why did GENCODE change the main annotation file from Comprehensive to Basic
GENCODE
10 months ago by
gernophil
▴ 80
0
votes
0
replies
1.1k
views
Answer:
Answer: Extracting exons using GenomicFeatures is different from manual extraction
10 months ago by
gernophil
▴ 80
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