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Comment: Comment: keep read association with mpileup
18 months ago by gernophil ▴ 130
0
votes
1
reply
2.7k
views
Comment: Comment: extract sequence from genome by region
18 months ago by gernophil ▴ 130
0
votes
1
reply
980
views
Comment: Comment: keep read association with mpileup
18 months ago by gernophil ▴ 130
0
votes
1
reply
2.7k
views
Comment: Comment: extract sequence from genome by region
18 months ago by gernophil ▴ 130
1
vote
4
replies
980
views
keep read association with mpileup
mpileup samtools
updated 18 months ago by 45k • written 18 months ago by ▴ 130
0
votes
1
reply
2.7k
views
Comment: Comment: extract sequence from genome by region
18 months ago by gernophil ▴ 130
0
votes
0
replies
2.7k
views
Comment: Comment: extract sequence from genome by region
18 months ago by gernophil ▴ 130
0
votes
1
reply
2.7k
views
Comment: Comment: extract sequence from genome by region
18 months ago by gernophil ▴ 130
3
votes
19
replies
2.7k
views
extract sequence from genome by region
fasta
updated 18 months ago by 45k • written 18 months ago by ▴ 130
2
votes
3
replies
1.6k
views
Extracting exons using GenomicFeatures is different from manual extraction
R GenomicFeatures
updated 19 months ago by ▴ 150 • written 24 months ago by ▴ 130
1
vote
1
reply
1.0k
views
CHOPCHOP command line
sgRNA chopchop
updated 22 months ago by 151k • written 2.3 years ago by ▴ 130
0
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0
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39k
views
Comment: Comment: Extract Total Non-Overlapping Exon Length Per Gene With Bioconductor
24 months ago by gernophil ▴ 130
0
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0
replies
2.1k
views
Comment: Comment: Why did GENCODE change the main annotation file from Comprehensive to Basic
24 months ago by gernophil ▴ 130
0
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1
reply
2.1k
views
Comment: Comment: Why did GENCODE change the main annotation file from Comprehensive to Basic
24 months ago by gernophil ▴ 130
0
votes
1
reply
2.1k
views
Comment: Comment: Why did GENCODE change the main annotation file from Comprehensive to Basic
24 months ago by gernophil ▴ 130
0
votes
1
reply
2.1k
views
Comment: Comment: Why did GENCODE change the main annotation file from Comprehensive to Basic
24 months ago by gernophil ▴ 130
1
vote
8
replies
2.1k
views
Why did GENCODE change the main annotation file from Comprehensive to Basic
GENCODE
24 months ago by gernophil ▴ 130
0
votes
0
replies
1.6k
views
Answer: Answer: Extracting exons using GenomicFeatures is different from manual extraction
24 months ago by gernophil ▴ 130
1
vote
0
replies
1.6k
views
Comment: Comment: Extracting exons using GenomicFeatures is different from manual extraction
24 months ago by gernophil ▴ 130
0
votes
0
replies
2.5k
views
Comment: Comment: ERROR using CIBERSORTx Docker version
24 months ago by gernophil ▴ 130
0
votes
0
replies
1.5k
views
Comment: Comment: CIBERSORTx/fractions docker outputs only zeros if --absolute TRUE
24 months ago by gernophil ▴ 130
0
votes
1
reply
1.5k
views
CIBERSORTx/fractions docker outputs only zeros if --absolute TRUE
docker CIBERSORTx
24 months ago by gernophil ▴ 130
0
votes
0
replies
882
views
Comment: Comment: Use DESeq (1) data with DESeq2 Package?
24 months ago by gernophil ▴ 130
1
vote
2
replies
882
views
Use DESeq (1) data with DESeq2 Package?
DESeq DESeq2
24 months ago by gernophil ▴ 130
0
votes
0
replies
66k
views
Answer: Answer: Calculating TPM from featureCounts output
24 months ago by gernophil ▴ 130
0
votes
7
replies
2.1k
views
fasterq-dump outputs "Cannot use '--ngc' as ngc file."
snakemake sra-tools SRA
updated 24 months ago by 45k • written 2.1 years ago by ▴ 130
0
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1
reply
2.1k
views
Comment: Comment: fasterq-dump outputs "Cannot use '--ngc' as ngc file."
2.1 years ago by gernophil ▴ 130
0
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1
reply
2.1k
views
Comment: Comment: fasterq-dump outputs "Cannot use '--ngc' as ngc file."
2.1 years ago by gernophil ▴ 130
0
votes
1
reply
2.1k
views
Comment: Comment: fasterq-dump outputs "Cannot use '--ngc' as ngc file."
2.1 years ago by gernophil ▴ 130
0
votes
0
replies
2.8k
views
Comment: Comment: BLAST Database error: No alias or index file found for nucleotide database
2.3 years ago by gernophil ▴ 130
0
votes
1
reply
2.8k
views
Comment: Comment: BLAST Database error: No alias or index file found for nucleotide database
2.3 years ago by gernophil ▴ 130
0
votes
1
reply
2.8k
views
Comment: Comment: BLAST Database error: No alias or index file found for nucleotide database
2.3 years ago by gernophil ▴ 130
0
votes
1
reply
1.1k
views
Comment: Comment: biomaRt crashes R studio
2.3 years ago by gernophil ▴ 130
1
vote
3
replies
1.1k
views
biomaRt crashes R studio
biomaRt
updated 2.3 years ago by 5.1k • written 2.3 years ago by ▴ 130
10
votes
4
replies
3.1k
views
Difference between ENSEMBL releases
release genome ENSEMBL
updated 2.4 years ago by 27k • written 2.4 years ago by ▴ 130
0
votes
1
reply
3.1k
views
Comment: Comment: Difference between ENSEMBL releases
2.4 years ago by gernophil ▴ 130
2
votes
5
replies
2.3k
views
Why multiple SYMBOLS, Consequences... for Variant Effect Predictor (VEP)
VEP
updated 14 months ago by ★ 2.4k • written 2.5 years ago by ▴ 130
3
votes
3
replies
1.2k
views
Annotate VCF with Pathways (without performing GSEA)
pathway_analysis VCF
2.5 years ago by gernophil ▴ 130
0
votes
0
replies
1.2k
views
Answer: Answer: Annotate VCF with Pathways (without performing GSEA)
2.5 years ago by gernophil ▴ 130
0
votes
0
replies
1.2k
views
Comment: Comment: Annotate VCF with Pathways (without performing GSEA)
2.5 years ago by gernophil ▴ 130
1
vote
1
reply
754
views
Download SraRunTable via entrez-direct
SRA RunTable command line
updated 2.6 years ago by 151k • written 2.6 years ago by ▴ 130
1
vote
3
replies
1.5k
views
bcftools merge doesn't recalculate AF
bcftools
updated 2.7 years ago by 2.9k • written 2.7 years ago by ▴ 130
0
votes
0
replies
718
views
Filtering and sorting of multiallelic sites
VCF multiallelic
2.8 years ago by gernophil ▴ 130
4
votes
2
replies
1.4k
views
Better splitting of mutliallelic sites then bcftools norm --m-any
bcftools
4 days ago by gernophil ▴ 130
0
votes
0
replies
2.0k
views
Comment: Comment: Can't convert multiple BAMs from SRA to SAMs
2.9 years ago by gernophil ▴ 130
0
votes
1
reply
2.0k
views
Comment: Comment: Can't convert multiple BAMs from SRA to SAMs
2.9 years ago by gernophil ▴ 130
2
votes
6
replies
2.0k
views
Can't convert multiple SAMs from SRA to BAMs
samtools sam-dump SRA
updated 24 months ago by 45k • written 2.9 years ago by ▴ 130
0
votes
1
reply
2.0k
views
Comment: Comment: Can't convert multiple BAMs from SRA to SAMs
2.9 years ago by gernophil ▴ 130
0
votes
1
reply
1.8k
views
Comment: Comment: headers missing in efetch results for SRA database
2.9 years ago by gernophil ▴ 130
0
votes
1
reply
1.8k
views
Comment: Comment: headers missing in efetch results for SRA database
2.9 years ago by gernophil ▴ 130
102 results • Page 2 of 3
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