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Answer: Answer: Salmon RNA-Seq transcript quantification
24 days ago by Rob 7.1k
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2.6k
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Comment: Comment: STAR aligner - Is this still maintained?
9 weeks ago by Rob 7.1k
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2.6k
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Comment: Comment: STAR aligner - Is this still maintained?
9 weeks ago by Rob 7.1k
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2.6k
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Answer: Answer: STAR aligner - Is this still maintained?
10 weeks ago by Rob 7.1k
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816
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Answer: Answer: How to represent arbitrarily length kmer?
7 months ago by Rob 7.1k
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1.0k
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Comment: Comment: Non-existent transcript as a result from Salmon
7 months ago by Rob 7.1k
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1.0k
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Comment: Comment: Minimap2 mapping problem
8 months ago by Rob 7.1k
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1.1k
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Answer: Answer: Understanding Differing results between STAR and kallisto
9 months ago by Rob 7.1k
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2.4k
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Comment: Comment: What Are The Most Influential Bioinformatics/Computational Biology Papers Of 202
9 months ago by Rob 7.1k
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1.6k
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Comment: Comment: Salmon ~ Effective Length
9 months ago by Rob 7.1k
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1
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942
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Answer: Answer: Alternative gap introduced when comparing insertion/deletion results between min
9 months ago by Rob 7.1k
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1.6k
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Comment: Comment: Salmon ~ Effective Length
9 months ago by Rob 7.1k
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2.4k
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Comment: Comment: What Are The Most Influential Bioinformatics/Computational Biology Papers Of 202
10 months ago by Rob 7.1k
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1
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1.6k
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Answer: Answer: Salmon ~ Effective Length
10 months ago by Rob 7.1k
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1
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1.9k
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Answer: Answer: Salmon vs Kallisto vs RSEM
10 months ago by Rob 7.1k
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1
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764
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Answer: Answer: Number of non-ATCG nucleotides replaced by Salmon
10 months ago by Rob 7.1k
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1.2k
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Comment: Comment: Details on salmon index
10 months ago by Rob 7.1k
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1.2k
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Answer: Answer: Details on salmon index
10 months ago by Rob 7.1k
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1
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1.1k
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Comment: Comment: A c library for reading and writing sequences in fasta and fastq format.
13 months ago by Rob 7.1k
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1.1k
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Comment: Comment: Mapping vs Alignment mode in Salmon
14 months ago by Rob 7.1k
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1.1k
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Answer: Answer: Mapping vs Alignment mode in Salmon
14 months ago by Rob 7.1k
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2.5k
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Answer: Answer: is oxford nanopore technology data paired or single end sequencing?
14 months ago by Rob 7.1k
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2.0k
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Comment: Comment: Downstream analysis from STAR Alignment at transcript level
14 months ago by Rob 7.1k
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1
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2.0k
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Comment: Comment: Downstream analysis from STAR Alignment at transcript level
14 months ago by Rob 7.1k
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2.0k
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Answer: Answer: Downstream analysis from STAR Alignment at transcript level
14 months ago by Rob 7.1k
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0
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1.3k
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Comment: Comment: salmon with long reads
14 months ago by Rob 7.1k
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1
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3.3k
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Comment: Comment: How to speed Salmon index up
14 months ago by Rob 7.1k
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1
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3.3k
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Comment: Comment: How to speed Salmon index up
14 months ago by Rob 7.1k
2
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1
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1.3k
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Answer: Answer: salmon with long read
14 months ago by Rob 7.1k
6
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2
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2.4k
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Answer: Answer: What Are The Most Influential Bioinformatics/Computational Biology Papers Of 202
16 months ago by Rob 7.1k
4
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0
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1.1k
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Answer: Answer: Fetch Fastq files directly for SRA data
18 months ago by Rob 7.1k
2
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0
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5.0k
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Comment: Comment: A list of technical advantages of Snakemake over Nextflow | Cloud solution for S
18 months ago by Rob 7.1k
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1
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1.6k
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Comment: Comment: Problem creating salmon index
20 months ago by Rob 7.1k
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0
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1.4k
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Answer: Answer: scRNAseq: thoughts on merging datasets generating from different version of 10x
20 months ago by Rob 7.1k
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1
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3.3k
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Comment: Comment: Mapping vs Alignment
21 months ago by Rob 7.1k
7
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1
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3.3k
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Answer: Answer: Mapping vs Alignment
21 months ago by Rob 7.1k
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2
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3.1k
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Comment: Comment: How to discard alignments from SAM/BAM file that have mismatches
21 months ago by Rob 7.1k
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1
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1.2k
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Answer: Answer: How does salmon uses polyester?
23 months ago by Rob 7.1k
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0
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3.9k
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Comment: Comment: g++: error：unrecognized command line option ‘-std=c++2a’
23 months ago by Rob 7.1k
2
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0
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3.3k
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Comment: Comment: Obtaining TPM values from STAR alignment and counts with featurecounts using R's
23 months ago by Rob 7.1k
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0
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1.4k
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Answer: Answer: How to get fraction of unspliced reads for specific gene from scRNAseq Cell Rang
2.0 years ago by Rob 7.1k
6
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2
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3.1k
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Answer: Answer: How does 10x Genomics 3' single cell data have reads aligning to exons that aren
2.1 years ago by Rob 7.1k
2
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1
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2.4k
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Comment: Comment: salmon output interpretation
2.1 years ago by Rob 7.1k
2
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0
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3.8k
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Comment: Comment: long read + salmon? (transcript abundance)
2.1 years ago by Rob 7.1k
7
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1
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3.8k
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Answer: Answer: long read + salmon? (transcript abundance)
updated 2.1 years ago by 87k • written 2.1 years ago by 7.1k
1
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1
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1.3k
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Answer: Answer: Salmon lib_format_counts.json - explanation
2.1 years ago by Rob 7.1k
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2
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1.6k
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Answer: Answer: Salmon TPM calculation constant
2.1 years ago by Rob 7.1k
4
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0
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2.1k
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Comment: Comment: KMP algorithm's time complexity
2.2 years ago by Rob 7.1k
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1
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10k
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Comment: Comment: Rust or C++, what to learn after Go for high-performance bioinformatics tools?
2.2 years ago by Rob 7.1k
6
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0
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1.9k
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Comment: Comment: How can I check if an RNA-Seq data is stranded (strand-specific) or not?
2.3 years ago by Rob 7.1k
361 results • Page 1 of 8
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