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4
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2
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595
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Answer: Answer: How to represent arbitrarily length kmer?
3 months ago by Rob 6.9k
2
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0
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656
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Comment: Comment: Non-existent transcript as a result from Salmon
4 months ago by Rob 6.9k
0
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1
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633
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Comment: Comment: Minimap2 mapping problem
5 months ago by Rob 6.9k
3
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0
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709
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Answer: Answer: Understanding Differing results between STAR and kallisto
5 months ago by Rob 6.9k
1
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0
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1.9k
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Comment: Comment: What Are The Most Influential Bioinformatics/Computational Biology Papers Of 202
5 months ago by Rob 6.9k
1
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0
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1.1k
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Comment: Comment: Salmon ~ Effective Length
6 months ago by Rob 6.9k
3
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1
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638
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Answer: Answer: Alternative gap introduced when comparing insertion/deletion results between min
6 months ago by Rob 6.9k
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1
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1.1k
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Comment: Comment: Salmon ~ Effective Length
6 months ago by Rob 6.9k
1
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0
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1.9k
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Comment: Comment: What Are The Most Influential Bioinformatics/Computational Biology Papers Of 202
6 months ago by Rob 6.9k
1
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1
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1.1k
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Answer: Answer: Salmon ~ Effective Length
6 months ago by Rob 6.9k
2
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1
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1.2k
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Answer: Answer: Salmon vs Kallisto vs RSEM
6 months ago by Rob 6.9k
3
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1
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541
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Answer: Answer: Number of non-ATCG nucleotides replaced by Salmon
7 months ago by Rob 6.9k
1
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0
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845
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Comment: Comment: Details on salmon index
7 months ago by Rob 6.9k
5
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1
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845
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Answer: Answer: Details on salmon index
7 months ago by Rob 6.9k
1
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1
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661
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Comment: Comment: A c library for reading and writing sequences in fasta and fastq format.
9 months ago by Rob 6.9k
1
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1
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835
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Comment: Comment: Mapping vs Alignment mode in Salmon
10 months ago by Rob 6.9k
0
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1
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835
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Answer: Answer: Mapping vs Alignment mode in Salmon
10 months ago by Rob 6.9k
6
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0
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1.9k
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Answer: Answer: is oxford nanopore technology data paired or single end sequencing?
10 months ago by Rob 6.9k
1
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0
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1.4k
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Comment: Comment: Downstream analysis from STAR Alignment at transcript level
11 months ago by Rob 6.9k
1
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1
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1.4k
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Comment: Comment: Downstream analysis from STAR Alignment at transcript level
11 months ago by Rob 6.9k
0
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1
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1.4k
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Answer: Answer: Downstream analysis from STAR Alignment at transcript level
11 months ago by Rob 6.9k
1
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0
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937
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Comment: Comment: salmon with long reads
11 months ago by Rob 6.9k
0
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1
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2.6k
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Comment: Comment: How to speed Salmon index up
11 months ago by Rob 6.9k
1
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1
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2.6k
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Comment: Comment: How to speed Salmon index up
11 months ago by Rob 6.9k
2
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1
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937
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Answer: Answer: salmon with long read
11 months ago by Rob 6.9k
6
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2
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1.9k
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Answer: Answer: What Are The Most Influential Bioinformatics/Computational Biology Papers Of 202
12 months ago by Rob 6.9k
4
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0
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934
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Answer: Answer: Fetch Fastq files directly for SRA data
15 months ago by Rob 6.9k
2
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0
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4.3k
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Comment: Comment: A list of technical advantages of Snakemake over Nextflow | Cloud solution for S
15 months ago by Rob 6.9k
0
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1
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1.3k
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Comment: Comment: Problem creating salmon index
17 months ago by Rob 6.9k
0
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0
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1.2k
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Answer: Answer: scRNAseq: thoughts on merging datasets generating from different version of 10x
17 months ago by Rob 6.9k
1
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1
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2.7k
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Comment: Comment: Mapping vs Alignment
17 months ago by Rob 6.9k
6
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1
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2.7k
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Answer: Answer: Mapping vs Alignment
17 months ago by Rob 6.9k
1
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2
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2.6k
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Comment: Comment: How to discard alignments from SAM/BAM file that have mismatches
18 months ago by Rob 6.9k
1
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1
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977
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Answer: Answer: How does salmon uses polyester?
19 months ago by Rob 6.9k
0
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0
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3.5k
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Comment: Comment: g++: error：unrecognized command line option ‘-std=c++2a’
19 months ago by Rob 6.9k
2
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0
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2.9k
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Comment: Comment: Obtaining TPM values from STAR alignment and counts with featurecounts using R's
19 months ago by Rob 6.9k
1
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0
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1.1k
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Answer: Answer: How to get fraction of unspliced reads for specific gene from scRNAseq Cell Rang
21 months ago by Rob 6.9k
6
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2
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2.5k
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Answer: Answer: How does 10x Genomics 3' single cell data have reads aligning to exons that aren
21 months ago by Rob 6.9k
2
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1
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2.0k
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Comment: Comment: salmon output interpretation
21 months ago by Rob 6.9k
2
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0
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3.3k
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Comment: Comment: long read + salmon? (transcript abundance)
21 months ago by Rob 6.9k
7
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1
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3.3k
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Answer: Answer: long read + salmon? (transcript abundance)
updated 21 months ago by 86k • written 21 months ago by 6.9k
1
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1
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1.1k
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Answer: Answer: Salmon lib_format_counts.json - explanation
21 months ago by Rob 6.9k
1
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2
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1.4k
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Answer: Answer: Salmon TPM calculation constant
22 months ago by Rob 6.9k
4
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0
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1.7k
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Comment: Comment: KMP algorithm's time complexity
23 months ago by Rob 6.9k
0
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1
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9.2k
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Comment: Comment: Rust or C++, what to learn after Go for high-performance bioinformatics tools?
23 months ago by Rob 6.9k
6
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0
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1.6k
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Comment: Comment: How can I check if an RNA-Seq data is stranded (strand-specific) or not?
2.0 years ago by Rob 6.9k
1
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1
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2.7k
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Comment: Comment: When is it advantageous to use a non-splice aware aligner like BowTie2 over a sp
2.1 years ago by Rob 6.9k
0
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1
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1.4k
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Comment: Comment: CellRanger v. 2.0 and v. 7.0
2.1 years ago by Rob 6.9k
1
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1
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1.4k
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Answer: Answer: CellRanger v. 2.0 and v. 7.0
2.1 years ago by Rob 6.9k
1
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0
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3.8k
views
Comment: Comment: What does the fragment length (-l) argument in Kallisto actually do?
2.1 years ago by Rob 6.9k
357 results • Page 1 of 8
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