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Comment: Comment: Bambu on illumina short reads sequencing
2 days ago by Rob 7.1k
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472
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Comment: Comment: Drastic drop in RNA-seq read mapping rate when disabling gaps in Bowtie2
25 days ago by Rob 7.1k
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Answer: Answer: Salmon RNA-Seq transcript quantification
3 months ago by Rob 7.1k
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3.6k
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Comment: Comment: STAR aligner - Is this still maintained?
4 months ago by Rob 7.1k
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3.6k
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Comment: Comment: STAR aligner - Is this still maintained?
4 months ago by Rob 7.1k
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3.6k
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Answer: Answer: STAR aligner - Is this still maintained?
4 months ago by Rob 7.1k
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1.0k
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Answer: Answer: How to represent arbitrarily length kmer?
9 months ago by Rob 7.1k
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0
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1.3k
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Comment: Comment: Non-existent transcript as a result from Salmon
10 months ago by Rob 7.1k
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1
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1.3k
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Comment: Comment: Minimap2 mapping problem
11 months ago by Rob 7.1k
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0
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1.4k
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Answer: Answer: Understanding Differing results between STAR and kallisto
11 months ago by Rob 7.1k
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2.8k
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Comment: Comment: What Are The Most Influential Bioinformatics/Computational Biology Papers Of 202
11 months ago by Rob 7.1k
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0
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1.9k
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Comment: Comment: Salmon ~ Effective Length
11 months ago by Rob 7.1k
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1.2k
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Answer: Answer: Alternative gap introduced when comparing insertion/deletion results between min
12 months ago by Rob 7.1k
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1
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1.9k
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Comment: Comment: Salmon ~ Effective Length
12 months ago by Rob 7.1k
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0
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2.8k
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Comment: Comment: What Are The Most Influential Bioinformatics/Computational Biology Papers Of 202
12 months ago by Rob 7.1k
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1
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1.9k
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Answer: Answer: Salmon ~ Effective Length
12 months ago by Rob 7.1k
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2.4k
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Answer: Answer: Salmon vs Kallisto vs RSEM
12 months ago by Rob 7.1k
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1
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909
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Answer: Answer: Number of non-ATCG nucleotides replaced by Salmon
12 months ago by Rob 7.1k
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1.5k
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Comment: Comment: Details on salmon index
13 months ago by Rob 7.1k
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1.5k
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Answer: Answer: Details on salmon index
13 months ago by Rob 7.1k
2
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1
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1.6k
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Comment: Comment: A c library for reading and writing sequences in fasta and fastq format.
15 months ago by Rob 7.1k
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1
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1.4k
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Comment: Comment: Mapping vs Alignment mode in Salmon
16 months ago by Rob 7.1k
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1
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1.4k
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Answer: Answer: Mapping vs Alignment mode in Salmon
16 months ago by Rob 7.1k
6
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3.1k
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Answer: Answer: is oxford nanopore technology data paired or single end sequencing?
16 months ago by Rob 7.1k
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1
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2.5k
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Comment: Comment: Downstream analysis from STAR Alignment at transcript level
16 months ago by Rob 7.1k
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1
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2.5k
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Comment: Comment: Downstream analysis from STAR Alignment at transcript level
16 months ago by Rob 7.1k
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1
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2.5k
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Answer: Answer: Downstream analysis from STAR Alignment at transcript level
16 months ago by Rob 7.1k
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0
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1.6k
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Comment: Comment: salmon with long reads
17 months ago by Rob 7.1k
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1
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4.0k
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Comment: Comment: How to speed Salmon index up
17 months ago by Rob 7.1k
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1
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4.0k
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Comment: Comment: How to speed Salmon index up
17 months ago by Rob 7.1k
3
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1
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1.6k
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Answer: Answer: salmon with long read
17 months ago by Rob 7.1k
6
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2
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2.8k
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Answer: Answer: What Are The Most Influential Bioinformatics/Computational Biology Papers Of 202
18 months ago by Rob 7.1k
4
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0
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1.3k
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Answer: Answer: Fetch Fastq files directly for SRA data
20 months ago by Rob 7.1k
2
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0
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5.4k
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Comment: Comment: A list of technical advantages of Snakemake over Nextflow | Cloud solution for S
21 months ago by Rob 7.1k
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1
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2.0k
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Comment: Comment: Problem creating salmon index
23 months ago by Rob 7.1k
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0
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1.6k
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Answer: Answer: scRNAseq: thoughts on merging datasets generating from different version of 10x
23 months ago by Rob 7.1k
1
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1
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3.8k
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Comment: Comment: Mapping vs Alignment
23 months ago by Rob 7.1k
8
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1
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3.8k
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Answer: Answer: Mapping vs Alignment
23 months ago by Rob 7.1k
1
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2
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3.6k
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Comment: Comment: How to discard alignments from SAM/BAM file that have mismatches
24 months ago by Rob 7.1k
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1
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1.4k
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Answer: Answer: How does salmon uses polyester?
2.1 years ago by Rob 7.1k
0
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0
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4.1k
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Comment: Comment: g++: error：unrecognized command line option ‘-std=c++2a’
2.1 years ago by Rob 7.1k
2
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0
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3.6k
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Comment: Comment: Obtaining TPM values from STAR alignment and counts with featurecounts using R's
2.1 years ago by Rob 7.1k
1
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0
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1.7k
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Answer: Answer: How to get fraction of unspliced reads for specific gene from scRNAseq Cell Rang
2.2 years ago by Rob 7.1k
6
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2
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3.7k
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Answer: Answer: How does 10x Genomics 3' single cell data have reads aligning to exons that aren
2.3 years ago by Rob 7.1k
2
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1
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2.7k
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Comment: Comment: salmon output interpretation
2.3 years ago by Rob 7.1k
2
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0
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4.3k
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Comment: Comment: long read + salmon? (transcript abundance)
2.3 years ago by Rob 7.1k
7
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1
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4.3k
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Answer: Answer: long read + salmon? (transcript abundance)
updated 2.3 years ago by 88k • written 2.3 years ago by 7.1k
1
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1
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1.5k
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Answer: Answer: Salmon lib_format_counts.json - explanation
2.3 years ago by Rob 7.1k
1
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2
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1.9k
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Answer: Answer: Salmon TPM calculation constant
2.3 years ago by Rob 7.1k
4
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0
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2.4k
views
Comment: Comment: KMP algorithm's time complexity
2.4 years ago by Rob 7.1k
363 results • Page 1 of 8
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