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Comment: Comment: Variant calling using samtools
18 months ago by lethalfang ▴ 160
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1.6k
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Comment: Comment: Variant calling using samtools
19 months ago by lethalfang ▴ 160
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Comment: Comment: What is the best way to retrieve gene name from variant mutation?
19 months ago by lethalfang ▴ 160
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Answer: Answer: Allele Frequency >0.5 for cancer somatic mutations?
19 months ago by lethalfang ▴ 160
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Comment: Comment: What's the general view on point & click bioinformatics for routine analyses?
19 months ago by lethalfang ▴ 160
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1.3k
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Answer: Answer: bedtools intersect zero output
19 months ago by lethalfang ▴ 160
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Comment: Comment: Using Copy Number Alterations detected in other studies for the same tumor cell
20 months ago by lethalfang ▴ 160
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Comment: Comment: Somatic truth set
20 months ago by lethalfang ▴ 160
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677
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Answer: Answer: GATK MQ-scores differ depending on reference genome
2.5 years ago by lethalfang ▴ 160
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Answer: Answer: What's probability of the same SNP occurring across all samples in a dataset by
2.6 years ago by lethalfang ▴ 160
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1.3k
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Answer: Answer: need to remove some part of header fasta file
2.8 years ago by lethalfang ▴ 160
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1.1k
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Answer: Answer: How can I know what is a good and bad variant call?
3.0 years ago by lethalfang ▴ 160
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2.3k
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Comment: Comment: Help understanding "sed" command in a loop
3.0 years ago by lethalfang ▴ 160
2
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1
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2.3k
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Answer: Answer: Help understanding "sed" command in a loop
3.0 years ago by lethalfang ▴ 160
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1
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1.6k
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Comment: Comment: A bash question
3.1 years ago by lethalfang ▴ 160
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1
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1.6k
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Answer: Answer: A bash question
3.1 years ago by lethalfang ▴ 160
3
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Answer: Answer: Should I buy a new apple M1-max with 64Gb Ram for single cell RNA seq analysis?
3.1 years ago by lethalfang ▴ 160
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957
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Answer: Answer: GATK mutech2: Sample not found in BAM header
3.1 years ago by lethalfang ▴ 160
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809
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Answer: Answer: Understanding FREQ; Reasons for variant allele frequency to deviate from 50%
3.1 years ago by lethalfang ▴ 160
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Comment: C: Bedtools Compare Multiple Bed Files?
updated 4.9 years ago by 44k • written 10.5 years ago by ▴ 160
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Comment: C: Somaticsniper Hangs Up
updated 5.1 years ago by 44k • written 9.9 years ago by ▴ 160
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2.9k
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Comment: Comment: Any experience using SomaticSeq for RNAseq SNV?
3.1 years ago by lethalfang ▴ 160
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