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Pseudobulk model design: account for both capture and individuals hashed within capture?
pseudobulk linear-modeling DESeq2 RNA-seq
updated 15 months ago by 44k • written 15 months ago by ▴ 40
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Comment: Comment: bcl2fastq not recognizing multiple barcode-mismatch argument
16 months ago by Derrik ▴ 40
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Comment: Comment: bcl2fastq not recognizing multiple barcode-mismatch argument
16 months ago by Derrik ▴ 40
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bcl2fastq not recognizing multiple barcode-mismatch argument
bcl2fastq
16 months ago by Derrik ▴ 40
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676
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GATK Mutect2: Would a matched normal sample be redundant with a pool of normals that included the sample?
Mutect2 PoN GATK
22 months ago by Derrik ▴ 40
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Answer: Answer: GATK Mutect2: Would a matched normal sample be redundant with a pool of normals
22 months ago by Derrik ▴ 40
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747
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Comment: Comment: Bulk RNA-seq, seeing strong differences between groups at a timepoint post-infec
2.1 years ago by Derrik ▴ 40
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2
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Bulk RNA-seq, seeing strong differences between groups at a timepoint post-infection, but no strong interaction effect
Time-series interaction RNA-seq DESeq2
2.1 years ago by Derrik ▴ 40
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Answer: Answer: time-series analysis with DESeq2
2.1 years ago by Derrik ▴ 40
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