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2
votes
7
replies
17k
views
How too choose outgroup for rooting a phylogenetic tree?
phylogeny sequence alignment
updated 16 months ago by ▴ 60 • written 10.0 years ago by ★ 2.8k
5
votes
7
replies
1.8k
views
Estimate running time of a orthoFinder
gene bacteria genome
updated 4.1 years ago by 55k • written 4.1 years ago by ★ 2.8k
3
votes
10
replies
9.8k
views
hmmindex: FATAL: failed to open HMM file Pfam-A.hmm for reading.
software-error sequencing Pfam hmmer
updated 2.2 years ago by 45k • written 9.9 years ago by ★ 2.8k
0
votes
0
replies
1.8k
views
Answer: A: Biological Replicates At Two Time Points in 16S rRNA Dataset
4.3 years ago by dago ★ 2.8k
3
votes
3
replies
1.6k
views
Integrate metabolomic and pathway information
KEGG metabolomics system biology R gene
updated 4.4 years ago by 20 • written 4.4 years ago by ★ 2.8k
0
votes
0
replies
1.6k
views
Comment: C: Integrate metabolomic and pathway information
4.4 years ago by dago ★ 2.8k
0
votes
0
replies
5.5k
views
Comment: C: R: download all KEGG pathways including KO and Compounds
4.8 years ago by dago ★ 2.8k
0
votes
0
replies
5.5k
views
Comment: C: R: download all KEGG pathways including KO and Compounds
4.8 years ago by dago ★ 2.8k
0
votes
1
reply
5.5k
views
Comment: C: R: download all KEGG pathways including KO and Compounds
4.8 years ago by dago ★ 2.8k
5
votes
7
replies
5.5k
views
R: download all KEGG pathways including KO and Compounds
R KEGG System_biology
updated 4.8 years ago by 87k • written 4.8 years ago by ★ 2.8k
0
votes
0
replies
5.7k
views
Answer: A: Metagenomics Raw dataset
updated 5.2 years ago by 45k • written 9.2 years ago by ★ 2.8k
3
votes
1
reply
4.0k
views
Answer: A: How to calculate the standalone interproscan output functionwise or domainwise?
updated 5.2 years ago by 45k • written 9.2 years ago by ★ 2.8k
0
votes
0
replies
1.5k
views
Comment: C: Bioinformatics study partner online
updated 5.3 years ago by 45k • written 9.2 years ago by ★ 2.8k
1
vote
1
reply
3.3k
views
Answer: A: How to blastp
updated 5.3 years ago by 45k • written 9.2 years ago by ★ 2.8k
0
votes
0
replies
5.0k
views
Comment: C: Which genome browser to display bacterial draft genomes?
updated 5.3 years ago by 45k • written 9.2 years ago by ★ 2.8k
0
votes
1
reply
3.3k
views
Answer: A: Bulding a pangenome consensus from many individuals
updated 5.3 years ago by 45k • written 9.2 years ago by ★ 2.8k
2
votes
0
replies
2.1k
views
Answer: A: Advice needed for GO enrichment
updated 5.3 years ago by 45k • written 9.2 years ago by ★ 2.8k
0
votes
0
replies
2.1k
views
Answer: A: predicting yeast protein secondary structure
updated 5.3 years ago by 45k • written 9.3 years ago by ★ 2.8k
1
vote
1
reply
1.9k
views
Comment: C: gatk v4.14.0 does not recognize matematical operators
5.4 years ago by dago ★ 2.8k
1
vote
8
replies
1.9k
views
gatk v4.14.0 does not recognize matematical operators
SNP java
5.4 years ago by dago ★ 2.8k
0
votes
1
reply
1.9k
views
Comment: C: gatk v4.14.0 does not recognize matematical operators
5.4 years ago by dago ★ 2.8k
0
votes
0
replies
1.9k
views
Comment: C: gatk v4.14.0 does not recognize matematical operators
5.4 years ago by dago ★ 2.8k
0
votes
1
reply
1.9k
views
Comment: C: gatk v4.14.0 does not recognize matematical operators
5.4 years ago by dago ★ 2.8k
0
votes
1
reply
3.5k
views
Answer: A: cluster comparison-gene diagrams
updated 5.5 years ago by 45k • written 10.1 years ago by ★ 2.8k
1
vote
0
replies
8.2k
views
Answer: A: Gene Ontology Enrichment Of Non-Model Bacterial Genome
updated 5.5 years ago by 45k • written 10.2 years ago by ★ 2.8k
0
votes
2
replies
2.3k
views
visualize enrichment results and compare multiple enrichments
R Bioconductor enrichment Statistic
updated 3.2 years ago by 45k • written 10.6 years ago by ★ 2.8k
0
votes
0
replies
1.2k
views
Answer: A: How to tell whether an MSA result is good and how to set parameters?
5.5 years ago by dago ★ 2.8k
0
votes
1
reply
5.7k
views
Comment: C: perl code to extract sequences from multi-line fasta works on all test files but
updated 5.6 years ago by 45k • written 9.3 years ago by ★ 2.8k
0
votes
0
replies
2.6k
views
Comment: C: Error extracting faa sequences from multifasta using faidx
updated 5.6 years ago by 45k • written 9.3 years ago by ★ 2.8k
0
votes
0
replies
2.6k
views
Comment: C: Error extracting faa sequences from multifasta using faidx
updated 5.6 years ago by 45k • written 9.3 years ago by ★ 2.8k
0
votes
1
reply
172k
views
Answer: A: The Biostar Handbook. A bioinformatics e-book for beginners.
5.6 years ago by dago ★ 2.8k
3
votes
2
replies
6.4k
views
what are the differences between an hmmscan and a Pfamscan against PfamA?
hmmscan Pfam protein hmm
updated 2.9 years ago by 45k • written 10.1 years ago by ★ 2.8k
5
votes
7
replies
9.1k
views
extract sequences from multi fasta using partial ID
sequence fasta python
updated 5.8 years ago by 45k • written 10.2 years ago by ★ 2.8k
0
votes
2
replies
40k
views
Answer: A: BLAST, setting maximum number of hits
updated 6.1 years ago by 45k • written 10.1 years ago by ★ 2.8k
1
vote
0
replies
5.9k
views
Answer: A: Comparative Microbial Genomics
updated 6.2 years ago by 45k • written 9.0 years ago by ★ 2.8k
2
votes
0
replies
2.7k
views
Answer: A: Find patterns in DNA sequence
updated 6.6 years ago by 45k • written 9.1 years ago by ★ 2.8k
5
votes
2
replies
2.1k
views
Forum: [Closed]Survey:Interested in how scientists communicate their work?This is how you can contribute!
survey communication sequencing
updated 22 months ago by 45k • written 7.3 years ago by ★ 2.8k
43
votes
8
replies
5.4k
views
13 follow
Forum: What Are The Most Influential Bioinformatics/Computational Biology Papers Of 2017?
sequencing survey SNP
updated 2.1 years ago by 45k • written 7.3 years ago by ★ 2.8k
0
votes
0
replies
4.7k
views
Comment: C: error bar in bar plot ggplot2
7.3 years ago by dago ★ 2.8k
1
vote
1
reply
6.8k
views
Comment: C: Recommendations of Linux distros for beginners in bioinformatics
7.3 years ago by dago ★ 2.8k
0
votes
1
reply
6.8k
views
Comment: C: Recommendations of Linux distros for beginners in bioinformatics
7.3 years ago by dago ★ 2.8k
2
votes
1
reply
6.8k
views
Answer: A: Recommendations of Linux distros for beginners in bioinformatics
7.3 years ago by dago ★ 2.8k
3
votes
0
replies
2.1k
views
Comment: Comment: [Closed]Survey:Interested in how scientists communicate their work?This is how y
updated 22 months ago by 45k • written 7.3 years ago by ★ 2.8k
4
votes
24
replies
7.2k
views
Split a concatenated alignment in multiple files
alignment fasta
updated 18 months ago by • 0 • written 10.0 years ago by ★ 2.8k
0
votes
2
replies
2.5k
views
Error duirng the creation of .sqn file for the submission to NCBI
genome sqn NCBI
updated 2.6 years ago by 45k • written 9.5 years ago by ★ 2.8k
2
votes
5
replies
2.5k
views
NCBI: dowload all genomes obtained from soil/marine/host associated bacteria/organisms
genome database sequence next-gen
updated 7.7 years ago by ★ 2.9k • written 7.7 years ago by ★ 2.8k
0
votes
0
replies
2.5k
views
Comment: C: NCBI: dowload all genomes obtained from soil/marine/host associated bacteria/org
7.7 years ago by dago ★ 2.8k
0
votes
1
reply
2.5k
views
Comment: C: NCBI: dowload all genomes obtained from soil/marine/host associated bacteria/org
7.7 years ago by dago ★ 2.8k
2
votes
2
replies
9.1k
views
Answer: A: GO enrichment analysis. Non-model organism.
7.7 years ago by dago ★ 2.8k
0
votes
0
replies
2.5k
views
Comment: C: Transcription factor enrichment analysis
7.7 years ago by dago ★ 2.8k
429 results • Page 1 of 9
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