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Comment: C: I have a bacterial genome and a predicted proteome from the same genome. How do
8.6 years ago by dago ★ 2.8k
12
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20
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5.0k
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Cluster proteins according to their domain architecture
PROTEIN domains clustering phylogeny alignment
updated 2.4 years ago by 44k • written 9.6 years ago by ★ 2.8k
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0
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5.2k
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Answer: A: KOG/COG annotation results chart
8.6 years ago by dago ★ 2.8k
1
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0
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2.2k
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Answer: A: synonymous vs nonsynonymous substitutions , Ts/tv etc
8.6 years ago by dago ★ 2.8k
1
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0
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2.4k
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Answer: A: download full genebank format sequences from NCBI
8.6 years ago by dago ★ 2.8k
11
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8
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6.5k
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Map gene gain and loss in phylogenetic tree
phylogenomics pangenome genome gene
8.7 years ago by dago ★ 2.8k
0
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0
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6.5k
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Comment: C: Map gene gain and loss in phylogenetic tree
8.7 years ago by dago ★ 2.8k
0
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1
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6.5k
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Comment: C: Map gene gain and loss in phylogenetic tree
8.7 years ago by dago ★ 2.8k
0
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1
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6.5k
views
Comment: C: Map gene gain and loss in phylogenetic tree
8.7 years ago by dago ★ 2.8k
1
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0
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5.8k
views
Answer: Answer: How to find GO file and do GO enrichment analysis ?
updated 2.6 years ago by 44k • written 9.8 years ago by ★ 2.8k
2
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0
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3.7k
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Answer: A: Bacteria identification using 16s rRNA sequencing data
8.7 years ago by dago ★ 2.8k
0
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0
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1.2k
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Answer: Answer: secretory proteins batch query
updated 2.4 years ago by 44k • written 8.8 years ago by ★ 2.8k
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0
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5.8k
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Comment: Comment: Phylogeny based on presence/absence of genes
updated 2.4 years ago by 44k • written 8.8 years ago by ★ 2.8k
3
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0
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5.8k
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Answer: Answer: Phylogeny based on presence/absence of genes
updated 2.4 years ago by 44k • written 8.8 years ago by ★ 2.8k
0
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0
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5.8k
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Comment: Comment: Phylogeny based on presence/absence of genes
updated 2.4 years ago by 44k • written 8.8 years ago by ★ 2.8k
0
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0
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3.2k
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Comment: C: A pipeline for comparative bacterial genomics involving cohorts (i.e. between gr
8.8 years ago by dago ★ 2.8k
1
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0
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3.4k
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Answer: Answer: blast2go testing for enrichment of GO terms
updated 2.3 years ago by 44k • written 8.8 years ago by ★ 2.8k
1
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1
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3.2k
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Answer: A: A pipeline for comparative bacterial genomics? Is it similar to comparative canc
8.8 years ago by dago ★ 2.8k
1
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5
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2.7k
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[solved]Extract region between specific genes from genbank file
python genome biopython R
updated 2.3 years ago by 44k • written 8.8 years ago by ★ 2.8k
0
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0
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2.7k
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Comment: C: Extract region between specific genes from genbank file
8.8 years ago by dago ★ 2.8k
1
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0
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2.7k
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Comment: C: Extract region between specific genes from genbank file
8.8 years ago by dago ★ 2.8k
0
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1
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2.7k
views
Comment: C: Extract region between specific genes from genbank file
8.8 years ago by dago ★ 2.8k
1
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0
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4.6k
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Answer: A: SNP correlation to PCA eigenvectors
8.8 years ago by dago ★ 2.8k
0
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1
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3.4k
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Comment: C: How to calculate the standalone interproscan output functionwise or domainwise?
8.8 years ago by dago ★ 2.8k
0
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1
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2.2k
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Comment: C: MODEL AVERAGING AND PHYLOGENETICS
8.8 years ago by dago ★ 2.8k
0
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0
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64k
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Comment: C: Best Practices/Softwares To Calculate Ka/Ks Ratio
8.9 years ago by dago ★ 2.8k
0
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0
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2.2k
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Comment: C: Novel genomic Islands
8.9 years ago by dago ★ 2.8k
16
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1
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2.9k
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Forum: What Are The Most Influential Bioinformatics/Computational Biology Papers Of 2015?
survey papers
updated 21 months ago by 44k • written 8.9 years ago by ★ 2.8k
0
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0
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3.6k
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Comment: Comment: Prediction of operon in bacterial genomes
updated 2.6 years ago by 44k • written 8.9 years ago by ★ 2.8k
0
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1
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3.6k
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Comment: C: Prediction of operon in bacterial genomes
8.9 years ago by dago ★ 2.8k
1
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7
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3.6k
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Prediction of operon in bacterial genomes
annotation genome operon
updated 2.6 years ago by 44k • written 9.7 years ago by ★ 2.8k
0
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0
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4.5k
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Answer: A: Pan- and core- genome in bacteria
8.9 years ago by dago ★ 2.8k
1
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4
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2.4k
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Error extracting faa sequences from multifasta using faidx
genome software-error
updated 2.3 years ago by 44k • written 8.9 years ago by ★ 2.8k
0
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1
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2.3k
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Submitting bacterial genomes to public databases (alternative to NCBI)/ Tutorial for submission to NCBI
genome database bacteria sequencing
updated 9.2 years ago by 147k • written 9.2 years ago by ★ 2.8k
0
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0
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4.1k
views
Answer: Answer: Is there a command line protocol for looking doing ontology/pathway analysis (i.
updated 2.2 years ago by 44k • written 9.2 years ago by ★ 2.8k
1
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0
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1.7k
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Comment: C: Localize TFBS, Search annotation
9.2 years ago by dago ★ 2.8k
1
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1
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1.7k
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Comment: C: Localize TFBS, Search annotation
9.2 years ago by dago ★ 2.8k
0
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0
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1.4k
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Comment: C: Where is Proteomics applied ?
9.2 years ago by dago ★ 2.8k
0
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0
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4.0k
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Answer: A: pipelines for pan-genome analysis
9.2 years ago by dago ★ 2.8k
0
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3
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2.7k
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What "column weight" really means in RaXML?
alignment RaxML phylogenetics
updated 24 months ago by 44k • written 9.7 years ago by ★ 2.8k
1
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0
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9.1k
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Comment: C: ANI calculation: alternatives to Jspecies
9.5 years ago by dago ★ 2.8k
1
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1
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9.1k
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Comment: C: ANI calculation: alternatives to Jspecies
9.5 years ago by dago ★ 2.8k
0
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0
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3.1k
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Comment: Comment: virulence factor of a bacteria
updated 22 months ago by 44k • written 9.5 years ago by ★ 2.8k
0
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1
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3.1k
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Answer: Answer: virulence factor of a bacteria
updated 22 months ago by 44k • written 9.5 years ago by ★ 2.8k
0
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3
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1.8k
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Comment: C: Protein family analysis software
9.5 years ago by dago ★ 2.8k
0
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0
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9.3k
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Comment: C: hmmindex: FATAL: failed to open HMM file Pfam-A.hmm for reading.
9.5 years ago by dago ★ 2.8k
0
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1
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9.3k
views
Comment: Comment: hmmindex: FATAL: failed to open HMM file Pfam-A.hmm for reading.
updated 22 months ago by 44k • written 9.5 years ago by ★ 2.8k
0
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0
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9.3k
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Comment: C: hmmindex: FATAL: failed to open HMM file Pfam-A.hmm for reading.
9.5 years ago by dago ★ 2.8k
0
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1
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9.3k
views
Comment: Comment: hmmindex: FATAL: failed to open HMM file Pfam-A.hmm for reading.
updated 22 months ago by 44k • written 9.5 years ago by ★ 2.8k
0
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0
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1.9k
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Comment: C: orthologus transcrition factors and their binding sites
9.5 years ago by dago ★ 2.8k
429 results • Page 4 of 9
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