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Q: --methimpute not recognized by Bismark and run in single core
next-gen bismark RNA-seq
updated 21 months ago by 44k • written 21 months ago by • 0
0
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0
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419
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Trying to calculate methylated C/All C , all output counts are 0
bismark RNA-seq
updated 21 months ago by 44k • written 21 months ago by • 0
0
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1
reply
570
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Error: line 1 did not have 7 elements. --Putting bismark extractor files into methimpute
RNA-seq
updated 21 months ago by ★ 3.0k • written 22 months ago by • 0
0
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0
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947
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Installation paths not writeable, unable to update packages error in installing methimpute
r RNA-seq
updated 22 months ago by 44k • written 22 months ago by • 0
0
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2
replies
1.5k
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Comment: Comment: Does this mean it is running? It has been like this for a while. I am using Trim
24 months ago by sam • 0
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2
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1.5k
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Comment: Comment: Does this mean it is running? It has been like this for a while. I am using Trim
24 months ago by sam • 0
0
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1
reply
468
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With which tool can I calculate mapping rate and the mapping efficiency?
next-gen RNA-seq
updated 24 months ago by 44k • written 24 months ago by • 0
3
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13
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2.9k
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How do you decide to set the run to SE or PE on trimmomatic?
next-gen RNA-seq
updated 24 months ago by 44k • written 24 months ago by • 0
0
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1
reply
2.9k
views
Comment: Comment: How do you decide to set the run to SE or PE on trimmomatic?
updated 24 months ago by 44k • written 24 months ago by • 0
0
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1
reply
1.4k
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Comment: Comment: How to decide which parameter to change for more quality results while trimming
24 months ago by sam • 0
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2
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1.4k
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Comment: Comment: How to decide which parameter to change for more quality results while trimming
24 months ago by sam • 0
0
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8
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1.4k
views
How to decide which parameter to change for more quality results while trimming with Trimmomatic?
trimmomatic next-gen RNA-seq
updated 24 months ago by 44k • written 24 months ago by • 0
1
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8
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1.5k
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Does this mean it is running? It has been like this for a while. I am using Trimmomatic.
next-gen software RNA-seq
updated 24 months ago by 85k • written 24 months ago by • 0
0
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1
reply
2.9k
views
Comment: Comment: How do you decide to set the run to SE or PE on trimmomatic?
updated 24 months ago by 44k • written 24 months ago by • 0
0
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3
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2.9k
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Comment: Comment: How do you decide to set the run to SE or PE on trimmomatic?
24 months ago by sam • 0
0
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1
reply
2.9k
views
Comment: Comment: How do you decide to set the run to SE or PE on trimmomatic?
24 months ago by sam • 0
0
votes
1
reply
2.9k
views
Comment: Comment: How do you decide to set the run to SE or PE on trimmomatic?
24 months ago by sam • 0
0
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0
replies
1.2k
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Comment: Comment: Exception in thread "main" java.lang.ArrayIndexOutOfBoundsException: Index 1 out
24 months ago by sam • 0
0
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1
reply
1.2k
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Comment: Comment: Exception in thread "main" java.lang.ArrayIndexOutOfBoundsException: Index 1 out
24 months ago by sam • 0
0
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4
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1.2k
views
Exception in thread "main" java.lang.ArrayIndexOutOfBoundsException: Index 1 out of bounds for length 1
next-gen RNA-seq
updated 24 months ago by 44k • written 24 months ago by • 0
0
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0
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645
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Comment: Comment: Exec format error
24 months ago by sam • 0
0
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2
replies
645
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Exec format error
next-gen RNA-seq
updated 24 months ago by 44k • written 2.0 years ago by • 0
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