Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
1
vote
1
reply
952
views
Comment: C: Extraction of information from stringtie output for selected gene ids
3.8 years ago by marina.v.yurieva ▴ 580
3
votes
0
replies
938
views
Data integration tools for multi-omics sequencing data
RNA-Seq ChIP-Seq sequencing next-gen
3.8 years ago by marina.v.yurieva ▴ 580
3
votes
2
replies
2.2k
views
StringTie --merge creates the same id for neighbouring genes
stringtie ensembl gene assembly
updated 3.6 years ago by • 0 • written 5.4 years ago by ▴ 580
0
votes
1
reply
2.5k
views
Answer: A: Retriving the base and its quality from fastq file
updated 4.9 years ago by 44k • written 8.9 years ago by ▴ 580
0
votes
1
reply
4.5k
views
Answer: A: Best way to generate rarefaction curves from 16S/18S data-reclustering?
updated 4.9 years ago by 44k • written 8.9 years ago by ▴ 580
0
votes
0
replies
5.4k
views
Comment: C: Bioinformatics project for a beginner
updated 4.9 years ago by 44k • written 8.9 years ago by ▴ 580
0
votes
1
reply
2.5k
views
Answer: A: Simulating single end reads with dwgsim
updated 4.9 years ago by 44k • written 8.9 years ago by ▴ 580
0
votes
0
replies
2.5k
views
Answer: A: 16S rRNA micobiome project: Which primers to use?
updated 5.0 years ago by 44k • written 9.3 years ago by ▴ 580
0
votes
0
replies
2.5k
views
Answer: A: Query Regarding 454 paired end Metagenomic Data
updated 5.0 years ago by 44k • written 9.4 years ago by ▴ 580
1
vote
1
reply
2.4k
views
Comment: C: Merge indel VCF files
updated 5.1 years ago by 44k • written 9.9 years ago by ▴ 580
0
votes
1
reply
1.2k
views
Comment: C: Stringtie --merge with PE and SE files
5.4 years ago by marina.v.yurieva ▴ 580
0
votes
3
replies
1.2k
views
Stringtie --merge with PE and SE files
assembly bam
5.4 years ago by marina.v.yurieva ▴ 580
0
votes
0
replies
3.0k
views
Comment: C: Gene(s) withTpm value(s) zero in kallisto though reads are mapped
6.3 years ago by marina.v.yurieva ▴ 580
1
vote
0
replies
3.3k
views
Comment: C: Stranded RNA-seq data visualization in UCSC
6.3 years ago by marina.v.yurieva ▴ 580
0
votes
0
replies
3.0k
views
Comment: C: bedGraph compress tools
6.3 years ago by marina.v.yurieva ▴ 580
0
votes
1
reply
3.3k
views
Comment: C: Stranded RNA-seq data visualization in UCSC
6.3 years ago by marina.v.yurieva ▴ 580
0
votes
1
reply
3.3k
views
Comment: C: Stranded RNA-seq data visualization in UCSC
6.3 years ago by marina.v.yurieva ▴ 580
7
votes
8
replies
3.3k
views
Stranded RNA-seq data visualization in UCSC
RNA-Seq stranded visualization bedgraph
updated 6.3 years ago by 6.9k • written 6.3 years ago by ▴ 580
0
votes
1
reply
2.3k
views
Comment: C: Problems uploading custom track to UCSC Genome Browser
6.3 years ago by marina.v.yurieva ▴ 580
1
vote
0
replies
2.3k
views
Comment: C: hg38 gtf file containing all RNAs and features
6.3 years ago by marina.v.yurieva ▴ 580
0
votes
2
replies
2.3k
views
Comment: C: Problems uploading custom track to UCSC Genome Browser
6.3 years ago by marina.v.yurieva ▴ 580
0
votes
0
replies
2.3k
views
Comment: C: hg38 gtf file containing all RNAs and features
6.3 years ago by marina.v.yurieva ▴ 580
2
votes
0
replies
7.4k
views
Answer: C: extract only rows eith numbers?
6.3 years ago by marina.v.yurieva ▴ 580
0
votes
1
reply
2.3k
views
Comment: C: Problems uploading custom track to UCSC Genome Browser
6.3 years ago by marina.v.yurieva ▴ 580
1
vote
0
replies
9.2k
views
Comment: C: Mapping vs Quasi-Mapping
6.3 years ago by marina.v.yurieva ▴ 580
0
votes
0
replies
3.0k
views
Comment: C: bedGraph compress tools
6.3 years ago by marina.v.yurieva ▴ 580
0
votes
1
reply
3.0k
views
Comment: C: bedGraph compress tools
6.3 years ago by marina.v.yurieva ▴ 580
0
votes
0
replies
3.0k
views
Comment: C: bedGraph compress tools
6.3 years ago by marina.v.yurieva ▴ 580
1
vote
8
replies
3.0k
views
bedGraph compress tools
bedtools bedGraph
6.3 years ago by marina.v.yurieva ▴ 580
0
votes
0
replies
1.2k
views
Comment: C: RNA seq with edge R
6.4 years ago by marina.v.yurieva ▴ 580
0
votes
0
replies
40k
views
Comment: C: How to know that your RNA-seq is stranded or not?
6.4 years ago by marina.v.yurieva ▴ 580
0
votes
0
replies
7.0k
views
Comment: C: What kind of distribution to you expect to see for RNA-Seq expression levels?
6.4 years ago by marina.v.yurieva ▴ 580
1
vote
4
replies
1.8k
views
Combining two databases in gtf file, bedtools gives wierd result
bedtools gtf noncode
updated 6.4 years ago by 20 • written 6.4 years ago by ▴ 580
0
votes
0
replies
1.8k
views
Comment: C: Combining two databases in gtf file, bedtools gives wierd result
6.4 years ago by marina.v.yurieva ▴ 580
0
votes
1
reply
1.8k
views
Comment: C: Combining two databases in gtf file, bedtools gives wierd result
6.4 years ago by marina.v.yurieva ▴ 580
3
votes
2
replies
10k
views
Answer: Answer: RNASeq user experience with Novogene?
updated 23 months ago by 44k • written 6.4 years ago by ▴ 580
0
votes
0
replies
14k
views
Comment: A: Gene names in Ballgown differential expression analysis
8.0 years ago by marina.v.yurieva ▴ 580
2
votes
4
replies
3.7k
views
Counts from cuffdiff VS featurecounts
RNA-Seq cufflinks counts
updated 8.1 years ago by 12k • written 8.1 years ago by ▴ 580
0
votes
1
reply
3.7k
views
Comment: C: Counts from cuffdiff VS featurecounts
8.1 years ago by marina.v.yurieva ▴ 580
3
votes
1
reply
2.4k
views
InterPro Scan error with nucleotide sequences
sequence domain database
updated 8.2 years ago by ★ 2.3k • written 8.2 years ago by ▴ 580
0
votes
0
replies
1.8k
views
Comment: C: Tophat/Cufflinks for stranded RNA-seq data
8.3 years ago by marina.v.yurieva ▴ 580
1
vote
2
replies
1.8k
views
Tophat/Cufflinks for stranded RNA-seq data
RNA-Seq
updated 8.3 years ago by 104k • written 8.3 years ago by ▴ 580
0
votes
0
replies
7.7k
views
Answer: A: Bioinformatics and wet lab science combined
9.4 years ago by marina.v.yurieva ▴ 580
0
votes
1
reply
2.3k
views
Comment: C: NCBI FASTA files are a bit crazy
9.4 years ago by marina.v.yurieva ▴ 580
0
votes
2
replies
2.1k
views
Answer: Answer: Segmentation fault for Igblastn with species human
updated 22 months ago by 44k • written 9.5 years ago by ▴ 580
1
vote
0
replies
5.2k
views
Answer: Answer: Metagenome raw data download
updated 2.6 years ago by 44k • written 9.5 years ago by ▴ 580
1
vote
0
replies
5.8k
views
Answer: Answer: Can you pool individuals to make 1 biological replicate?
updated 22 months ago by 44k • written 9.5 years ago by ▴ 580
0
votes
1
reply
5.6k
views
Comment: Comment: Removing bacterial contamination of mouse gut sequences through metagenomic tech
updated 22 months ago by 44k • written 9.5 years ago by ▴ 580
0
votes
1
reply
5.6k
views
Comment: Comment: Removing bacterial contamination of mouse gut sequences through metagenomic tech
updated 22 months ago by 44k • written 9.5 years ago by ▴ 580
0
votes
1
reply
5.6k
views
Comment: C: metagenomics of gut sequences
9.5 years ago by marina.v.yurieva ▴ 580
113 results • Page 1 of 3
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6