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questions
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comments
10
votes
4
replies
12k
views
How Can I Batch Blast Sequences To Identify Them?
blast
rrna
sequence
updated 4.1 years ago by
Biostar
20 • written 13.6 years ago by
John
▴ 790
5
votes
6
replies
4.2k
views
Accessing Cyanobase With The Biomart / Getbm Method
biomart
r
updated 12 months ago by
Ram
44k • written 14.7 years ago by
John
▴ 790
3
votes
4
replies
24k
views
How Can I Download The Results From An Ncbi Blast Search?
blast
ncbi
genbank
alignment
updated 6.6 years ago by
Biostar
20 • written 13.1 years ago by
John
▴ 790
5
votes
4
replies
10k
views
Which Statistical Congruence Tests Should I Use Before Concatenating Multiple Phylogenetic Trees?
phylogenetics
tree
statistics
updated 10.1 years ago by
Biostar
20 • written 13.4 years ago by
John
▴ 790
37
votes
7
replies
21k
views
6 follow
Can I Choose An Outgroup Based On Phylogenetic Tree Structure Alone?
phylogenetics
phylogeny
tree
updated 2.9 years ago by
Ram
44k • written 13.1 years ago by
John
▴ 790
16
votes
8
replies
9.3k
views
How Does Codeml Assign Internal Branch Numbers To Phylogenetic Trees?
codeml
paml
phylogenetics
tree
updated 10.7 years ago by
Biostar
20 • written 13.7 years ago by
John
▴ 790
35
votes
12
replies
9.1k
views
9 follow
Should I Strip Alignment Columns Before Making A Tree?
phylogenetics
tree
alignment
updated 23 months ago by
Ram
44k • written 13.7 years ago by
John
▴ 790
6
votes
2
replies
3.5k
views
What Are The Server Requirements For Analysis And Alignment Of 454 Environmental Metagenomics Data.
metagenomics
alignment
analysis
server
updated 11.3 years ago by
Biostar
20 • written 13.2 years ago by
John
▴ 790
1
vote
0
replies
2.7k
views
Comment:
C: How Can I Spot Membrane Localization Sequences In Yeast Aa Alignments?
12.3 years ago by
John
▴ 790
1
vote
0
replies
3.2k
views
Comment:
C: Should I Perform A Local Alignment To Try To Identify Localization Sequences?
12.3 years ago by
John
▴ 790
4
votes
3
replies
2.7k
views
How Can I Spot Membrane Localization Sequences In Yeast Aa Alignments?
sequence
alignment
12.3 years ago by
John
▴ 790
1
vote
5
replies
3.2k
views
Should I Perform A Local Alignment To Try To Identify Localization Sequences?
alignment
updated 12.3 years ago by
DG
7.3k • written 12.3 years ago by
John
▴ 790
0
votes
1
reply
2.8k
views
How Can I Identify A Yeast Gpi Anchor Sequence?
sequence
updated 12.3 years ago by
Neilfws
49k • written 12.3 years ago by
John
▴ 790
2
votes
1
reply
4.7k
views
How Can I Read The Output Of Exonerate In An External Sequence Viewer?
output
sequence
viewer
updated 12.7 years ago by
Leszek
4.2k • written 12.7 years ago by
John
▴ 790
2
votes
4
replies
11k
views
How To Collapse Polytomies On A Phylogenetic Tree?
phylogenetics
tree
updated 12.7 years ago by
SES
8.6k • written 12.7 years ago by
John
▴ 790
4
votes
2
replies
2.8k
views
Exonerate, How To Search A Whole Genome For A Gene, Including Mismatches?
dna
alignment
updated 13.2 years ago by
Jarretinha
3.4k • written 13.2 years ago by
John
▴ 790
1
vote
0
replies
4.2k
views
Comment:
C: What'S The Easiest Way To Blast 5000 Sequences Against An Exon Fragment?
13.6 years ago by
John
▴ 790
15
votes
7
replies
4.2k
views
6 follow
What'S The Easiest Way To Blast 5000 Sequences Against An Exon Fragment?
blast
est
updated 13.6 years ago by
Larry_Parnell
16k • written 13.6 years ago by
John
▴ 790
1
vote
0
replies
9.9k
views
Comment:
C: What Is The Easiest Way To Download All Results From An Ncbi Est Query?
13.7 years ago by
John
▴ 790
6
votes
5
replies
9.9k
views
What Is The Easiest Way To Download All Results From An Ncbi Est Query?
eutils
perl
fasta
updated 13.7 years ago by
Neilfws
49k • written 13.7 years ago by
John
▴ 790
1
vote
0
replies
3.6k
views
Comment:
C: How To Submit Taxon Id When Submitting Sequences To Genbank With Sequin?
13.7 years ago by
John
▴ 790
4
votes
2
replies
3.6k
views
How To Submit Taxon Id When Submitting Sequences To Genbank With Sequin?
genbank
fasta
updated 13.7 years ago by
Chris Evelo
10k • written 13.7 years ago by
John
▴ 790
14
votes
11
replies
18k
views
How Can I Label Internal Branches Of A Phylogenetic Tree?
phylogenetics
tree
updated 13.7 years ago by
jhc
★ 3.0k • written 13.7 years ago by
John
▴ 790
0
votes
0
replies
9.3k
views
Comment:
C: How Does Codeml Assign Internal Branch Numbers To Phylogenetic Trees?
13.7 years ago by
John
▴ 790
1
vote
0
replies
9.3k
views
Comment:
C: How Does Codeml Assign Internal Branch Numbers To Phylogenetic Trees?
13.7 years ago by
John
▴ 790
11
votes
2
replies
4.2k
views
What Is A Good Measure Of Sequence Divergence?
distance
phylogenetics
tree
evolution
sequence
updated 13.9 years ago by
Amr
▴ 170 • written 13.9 years ago by
John
▴ 790
1
vote
0
replies
4.2k
views
Comment:
C: Accessing Cyanobase With The Biomart / Getbm Method
14.7 years ago by
John
▴ 790
1
vote
0
replies
4.2k
views
Comment:
C: Accessing Cyanobase With The Biomart / Getbm Method
14.7 years ago by
John
▴ 790
1
vote
0
replies
24k
views
Comment:
C: How Do I Access And Query Entire Genome Sequences With R
14.7 years ago by
John
▴ 790
39
votes
15
replies
24k
views
9 follow
How Do I Access And Query Entire Genome Sequences With R
gene
r
updated 12 months ago by
Ram
44k • written 14.7 years ago by
John
▴ 790
1
vote
0
replies
3.2k
views
Comment:
C: If I Have 4 Sequence Runs, 2 In Each Direction, 1 Bp Is Different, On Each, Shou
14.7 years ago by
John
▴ 790
1
vote
0
replies
3.2k
views
Comment:
C: If I Have 4 Sequence Runs, 2 In Each Direction, 1 Bp Is Different, On Each, Shou
14.7 years ago by
John
▴ 790
1
vote
0
replies
3.2k
views
Comment:
C: If I Have 4 Sequence Runs, 2 In Each Direction, 1 Bp Is Different, On Each, Shou
14.7 years ago by
John
▴ 790
13
votes
9
replies
3.2k
views
If I Have 4 Sequence Runs, 2 In Each Direction, 1 Bp Is Different, On Each, Should I Resequence?
sequencing
dna
updated 13 months ago by
Ram
44k • written 14.7 years ago by
John
▴ 790
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