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126
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How to plot coverage and depth statistics of a bam file
bam coverage depth next-gen-sequencing
updated 20 months ago by ▴ 40 • written 11.0 years ago by ▴ 380
0
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1
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16k
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Comment: Comment: Online/remote/distance learning/ - partime/fulltime - PhD, Bioinformatics in USA
4.1 years ago by kay ▴ 380
3
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0
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1.7k
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Answer: A: TCGA data on cloud
6.8 years ago by kay ▴ 380
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0
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3.8k
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Comment: C: How to apply GenVisR Bioconductor package on VCF file
7.0 years ago by kay ▴ 380
0
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2
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3.8k
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Answer: A: How to apply GenVisR Bioconductor package on VCF file
7.3 years ago by kay ▴ 380
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6
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3.8k
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How to apply GenVisR Bioconductor package on VCF file
R bioconductor vcf
7.3 years ago by kay ▴ 380
0
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6
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3.9k
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identification of viral gene from fastq or BAM file
RNA-Seq
updated 3.5 years ago by 45k • written 10.8 years ago by ▴ 380
0
votes
4
replies
3.2k
views
Is it possible to add all possible VCF annotations in one command using ANNOVAR ?
annovar
updated 8.8 years ago by 20 • written 9.0 years ago by ▴ 380
8
votes
4
replies
17k
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error installing samtools on ubuntu
samtools
updated 9.0 years ago by 5.0k • written 9.0 years ago by ▴ 380
2
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0
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17k
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Comment: A: error installing samtools on ubuntu
9.0 years ago by kay ▴ 380
0
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1
reply
3.2k
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Comment: C: Is it possible to add all possible VCF annotations in one command using ANNOVAR
9.0 years ago by kay ▴ 380
1
vote
1
reply
3.4k
views
Snpsift to filter a number of genes
SNP variant annotation snpsift snpeff
9.3 years ago by kay ▴ 380
1
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0
replies
2.1k
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Looking for publicly available VCF files on cardiology
vcf
updated 2.9 years ago by 45k • written 9.4 years ago by ▴ 380
0
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1
reply
2.9k
views
How to find annotation file version from CDF file
SNP affymetrix
updated 2.9 years ago by 45k • written 9.5 years ago by ▴ 380
0
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0
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3.9k
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Comment: C: identification of viral gene from fastq or BAM file
10.8 years ago by kay ▴ 380
0
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1
reply
3.9k
views
Comment: Comment: identification of viral gene from fastq or BAM file
updated 3.5 years ago by 45k • written 10.8 years ago by ▴ 380
1
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2
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2.9k
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Does anyone know how the Y axis (% of reference) for the "coverage distribution" graph of the BAMStats program is calculated ?
next-gen bam RNA-Seq
updated 3.6 years ago by 45k • written 11.0 years ago by ▴ 380
0
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0
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116k
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Comment: Comment: How to plot coverage and depth statistics of a bam file
updated 3.6 years ago by 45k • written 11.0 years ago by ▴ 380
0
votes
1
reply
116k
views
Comment: A: How to plot coverage and depth statistics of a bam file
11.0 years ago by kay ▴ 380
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