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Comment: Comment: Parameters for annotation with maker
6 hours ago by san96 ▴ 180
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737
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Comment: Comment: Parameters for annotation with maker
4 months ago by san96 ▴ 180
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4
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737
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Parameters for annotation with maker
Maker masking plant annotation
6 hours ago by san96 ▴ 180
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13k
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Comment: Comment: How to extract fasta sequences from assembled transcripts generated by Stringtie
4 months ago by san96 ▴ 180
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13k
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Comment: Comment: How to extract fasta sequences from assembled transcripts generated by Stringtie
4 months ago by san96 ▴ 180
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13k
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Comment: Comment: How to extract fasta sequences from assembled transcripts generated by Stringtie
4 months ago by san96 ▴ 180
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0
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706
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Comment: Comment: bioinformatics tutorial on Oxford
5 months ago by san96 ▴ 180
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0
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654
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Answer: Answer: How to plot PCA for DEGs
5 months ago by san96 ▴ 180
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2.4k
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Comment: Comment: ORA with clusterProfiler
5 months ago by san96 ▴ 180
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2.4k
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Comment: Comment: ORA with clusterProfiler
5 months ago by san96 ▴ 180
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2.4k
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Comment: Comment: ORA with clusterProfiler
5 months ago by san96 ▴ 180
1
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2
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673
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Plant diploid genome, phashed, CLR reads, PECAT
diploid genome Phased
6 months ago by san96 ▴ 180
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0
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673
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Answer: Answer: Plant diploid genome, phashed, CLR reads, PECAT
6 months ago by san96 ▴ 180
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0
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673
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Comment: Comment: Plant diploid genome, phashed, CLR reads, PECAT
6 months ago by san96 ▴ 180
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673
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Comment: Comment: MAKER has many FAILED
8 months ago by san96 ▴ 180
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3
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673
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MAKER has many FAILED
genome softmask MAKER annotation
updated 8 months ago by 152k • written 8 months ago by ▴ 180
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4.6k
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Comment: Comment: Status of maker annotation
8 months ago by san96 ▴ 180
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4.6k
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Comment: Comment: Status of maker annotation
9 months ago by san96 ▴ 180
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1
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452
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Maker genome softmask
Maker genome softmask plant
updated 9 months ago by ★ 1.3k • written 9 months ago by ▴ 180
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288
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RepeatMasker without DNA transposons, satellites and SINEs
transposons DNA RepeatModeler RepeatMasker
11 months ago by san96 ▴ 180
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0
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768
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Comment: Comment: SPADES output
11 months ago by san96 ▴ 180
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2
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768
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SPADES output
contigs scaffolds output SPADES
11 months ago by san96 ▴ 180
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2.3k
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Comment: Comment: Basic guidance on Using 10x Genomics Data for De Novo Assembly
11 months ago by san96 ▴ 180
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1
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2.3k
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Comment: Comment: Basic guidance on Using 10x Genomics Data for De Novo Assembly
11 months ago by san96 ▴ 180
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0
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2.3k
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Comment: Comment: Basic guidance on Using 10x Genomics Data for De Novo Assembly
11 months ago by san96 ▴ 180
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1
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2.3k
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Comment: Comment: Basic guidance on Using 10x Genomics Data for De Novo Assembly
12 months ago by san96 ▴ 180
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1
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2.3k
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Answer: Answer: Basic guidance on Using 10x Genomics Data for De Novo Assembly
12 months ago by san96 ▴ 180
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0
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1.2k
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Comment: Comment: About runing Pilon on individual chromosomes when polish draft genome assembly
13 months ago by san96 ▴ 180
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0
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451
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Comment: Comment: Polish a large genome with Pilon
13 months ago by san96 ▴ 180
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1
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451
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Polish a large genome with Pilon
Pilon Pacbio Polish Illumina
13 months ago by san96 ▴ 180
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0
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1.4k
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Comment: Comment: Longest transcript variant per gene
13 months ago by san96 ▴ 180
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0
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1.4k
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Comment: Comment: Longest transcript variant per gene
13 months ago by san96 ▴ 180
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1.4k
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Comment: Comment: Longest transcript variant per gene
13 months ago by san96 ▴ 180
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0
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1.4k
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Comment: Comment: Longest transcript variant per gene
13 months ago by san96 ▴ 180
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7
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1.4k
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Longest transcript variant per gene
transcript longest variant orthofinder
13 months ago by san96 ▴ 180
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0
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1.4k
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Comment: Comment: Perfom a Gene Ontology Analysis from GO terms txt file
13 months ago by san96 ▴ 180
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1.4k
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Answer: Answer: Perfom a Gene Ontology Analysis from GO terms txt file
13 months ago by san96 ▴ 180
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1.4k
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Comment: Comment: Perfom a Gene Ontology Analysis from GO terms file
13 months ago by san96 ▴ 180
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0
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274
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Analysis of the gene family of a genome.
Genome gene-family
updated 14 months ago by 45k • written 14 months ago by ▴ 180
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1
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803
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Comment: Comment: GSEA analysis in R
14 months ago by san96 ▴ 180
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0
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1.2k
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Comment: Comment: Integration of transcriptomics and proteomics: difficult matching names
14 months ago by san96 ▴ 180
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0
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2.4k
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Comment: Comment: BRAKER3 genome annotation
14 months ago by san96 ▴ 180
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1
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678
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Comment: Comment: RNAseq 1 control 2 different treatment
14 months ago by san96 ▴ 180
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1
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2.4k
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Comment: Comment: BRAKER3 genome annotation
14 months ago by san96 ▴ 180
1
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0
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864
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Comment: Comment: Extracting information from gff3 file produced by augustus
14 months ago by san96 ▴ 180
1
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0
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601
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Answer: Answer: How do I identify gene duplication or paralogs in an annotated reference genome
14 months ago by san96 ▴ 180
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0
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2.7k
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Comment: Comment: KEGG analysis in R
14 months ago by san96 ▴ 180
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7
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2.7k
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KEGG analysis in R
KEGG clusterProfiler Zea-mays
updated 13 months ago by • 0 • written 14 months ago by ▴ 180
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1
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2.7k
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Comment: Comment: KEGG analysis in R
14 months ago by san96 ▴ 180
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1
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2.7k
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Comment: Comment: KEGG analysis in R
14 months ago by san96 ▴ 180
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