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3
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592
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Answer: Answer: Learning Nextflow
2 days ago by Juke34 9.2k
3
votes
1
reply
713
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Answer: Answer: Editing and Adding to a GTF file
6 weeks ago by Juke34 9.2k
0
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0
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495
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Comment: Comment: Reannotation of complete bacterial genome sequence
11 weeks ago by Juke34 9.2k
7
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5
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1.1k
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Tool: AliNe (Alignment in Nextflow)
nextflow alignment
3 months ago by Juke34 9.2k
0
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0
replies
1.1k
views
Answer: Answer: AliNe (Alignment in Nextflow)
3 months ago by Juke34 9.2k
15
votes
3
replies
1.7k
views
Tutorial: Avoiding the Pitfalls of the Anaconda License: A Practical Guide
conda Anaconda license
3 months ago by Juke34 9.2k
1
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0
replies
1.7k
views
Answer: Answer: Avoiding the Pitfalls of the Anaconda License: A Practical Guide
3 months ago by Juke34 9.2k
0
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0
replies
1.1k
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Comment: Comment: AliNe (Alignment in Nextflow)
3 months ago by Juke34 9.2k
0
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1
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1.1k
views
Comment: Comment: AliNe (Alignment in Nextflow)
3 months ago by Juke34 9.2k
3
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2
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2.1k
views
Answer: Answer: Preventing Conda/Mamba from accessing Anaconda repos when institution blocks the
4 months ago by Juke34 9.2k
1
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0
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13k
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Comment: Comment: How to extract fasta sequences from assembled transcripts generated by Stringtie
4 months ago by Juke34 9.2k
1
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1
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13k
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Comment: Comment: How to extract fasta sequences from assembled transcripts generated by Stringtie
4 months ago by Juke34 9.2k
1
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1
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13k
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Comment: Comment: How to extract fasta sequences from assembled transcripts generated by Stringtie
4 months ago by Juke34 9.2k
0
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0
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1.4k
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Comment: Comment: How modified GTF file into a BED file with chromosome aware format?
6 months ago by Juke34 9.2k
1
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1
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2.5k
views
Comment: Comment: The BUSCO assessment of the MAKER annotation results shows a low completeness
6 months ago by Juke34 9.2k
0
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2
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2.5k
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Comment: Comment: The BUSCO assessment of the MAKER annotation results shows a low completeness
6 months ago by Juke34 9.2k
0
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0
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667
views
Comment: Comment: Introducing SnakeMake.IO – Enhancing Snakemake Workflow Management
6 months ago by Juke34 9.2k
1
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1
reply
881
views
Answer: Answer: How to filter and keep longest isoform per gene in gff3 file ?
updated 7 months ago by 152k • written 7 months ago by 9.2k
0
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0
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1.4k
views
Comment: Comment: Create a fasta and gtf file
7 months ago by Juke34 9.2k
2
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1
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1.4k
views
Answer: Answer: Create a fasta and gtf file
7 months ago by Juke34 9.2k
0
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0
replies
1.7k
views
Comment: Comment: Avoiding the Pitfalls of the Anaconda License: A Practical Guide
7 months ago by Juke34 9.2k
0
votes
0
replies
1.1k
views
Comment: Comment: genome annotation and GFF file formation
8 months ago by Juke34 9.2k
0
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2
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1.4k
views
Answer: Answer: How can I extract 3'UTR of bacteria (Pseudomonas aeruginosa) without using R?
8 months ago by Juke34 9.2k
2
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1
reply
735
views
Answer: Answer: Need help with AUGUSTUS and AGAT for gene prediction and feature extraction, res
8 months ago by Juke34 9.2k
0
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0
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1.1k
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Comment: Comment: Awesome awesomeness bioinformatics
9 months ago by Juke34 9.2k
1
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1
reply
1.1k
views
Comment: Comment: Awesome awesomeness bioinformatics
9 months ago by Juke34 9.2k
10
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4
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1.1k
views
Forum: Awesome awesomeness bioinformatics
bioinformatics Awesome
9 months ago by Juke34 9.2k
0
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0
replies
4.4k
views
Comment: Comment: GTF file
9 months ago by Juke34 9.2k
1
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0
replies
4.4k
views
Answer: Answer: GTF file
9 months ago by Juke34 9.2k
1
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1
reply
4.6k
views
Comment: Comment: Status of maker annotation
9 months ago by Juke34 9.2k
0
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1
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4.4k
views
Comment: Comment: GTF file
9 months ago by Juke34 9.2k
1
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0
replies
4.4k
views
Comment: Comment: GTF file
9 months ago by Juke34 9.2k
0
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1
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4.4k
views
Comment: Comment: GTF file
9 months ago by Juke34 9.2k
0
votes
0
replies
5.9k
views
Comment: Comment: How to annotate eukaryotic genome
11 months ago by Juke34 9.2k
0
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0
replies
1.2k
views
Comment: Comment: Getting the coding_sequence.fasta from the .gff file from the AUGUSTUS gene pred
13 months ago by Juke34 9.2k
1
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1
reply
1.2k
views
Comment: Comment: Getting the coding_sequence.fasta from the .gff file from the AUGUSTUS gene pred
13 months ago by Juke34 9.2k
3
votes
0
replies
1.1k
views
Answer: Answer: Assume "yes" as the answer to any prompts with bioconda
14 months ago by Juke34 9.2k
0
votes
1
reply
904
views
Comment: Comment: Why are gene models from JGI non-sense when using AGAT to to extract proteins?
14 months ago by Juke34 9.2k
0
votes
0
replies
1.5k
views
Answer: Answer: Genbank Bacteriophage Genome Submission - Internal stop codons in CDS sequences
15 months ago by Juke34 9.2k
3
votes
0
replies
1.1k
views
Answer: Answer: why there is an asterisk symbol at the end of each proteins sequences offasta fi
15 months ago by Juke34 9.2k
1
vote
1
reply
13k
views
Comment: Comment: Create de novo repeat library
15 months ago by Juke34 9.2k
1
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0
replies
1.9k
views
Answer: Answer: Intersect gene IDs list and GFF3 to get the annotation.
15 months ago by Juke34 9.2k
0
votes
0
replies
1.1k
views
Answer: Answer: How can I get the sequences of the first 20nt of introns and the last 250nt of i
16 months ago by Juke34 9.2k
1
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0
replies
2.8k
views
Comment: Comment: Trying to wrap my head around Illumina paired end sequencing
17 months ago by Juke34 9.2k
0
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1
reply
1.4k
views
Comment: Comment: Gemoma error with gff file
18 months ago by Juke34 9.2k
1
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0
replies
3.4k
views
Comment: Comment: Assistance with Fungal Genome Annotation Using Maker and BLAST
20 months ago by Juke34 9.2k
1
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1
reply
3.4k
views
Comment: Comment: Assistance with Fungal Genome Annotation Using Maker and BLAST
20 months ago by Juke34 9.2k
1
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1
reply
3.4k
views
Comment: Comment: Assistance with Fungal Genome Annotation Using Maker and BLAST
20 months ago by Juke34 9.2k
0
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1
reply
2.4k
views
Comment: Comment: file conversion from gtf to gff3 for evidence modeler
20 months ago by Juke34 9.2k
0
votes
1
reply
2.4k
views
Comment: Comment: file conversion from gtf to gff3 for evidence modeler
20 months ago by Juke34 9.2k
998 results • Page 1 of 20
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