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Answer: Answer: How to filter and keep longest isoform per gene in gff3 file ?
updated 9 days ago by 147k • written 9 days ago by 8.9k
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659
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Comment: Comment: Create a fasta and gtf file
18 days ago by Juke34 8.9k
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659
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Answer: Answer: Create a fasta and gtf file
19 days ago by Juke34 8.9k
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528
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Comment: Comment: Avoiding the Pitfalls of the Anaconda License: A Practical Guide
20 days ago by Juke34 8.9k
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528
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Tutorial: Avoiding the Pitfalls of the Anaconda License: A Practical Guide
conda Anaconda license
20 days ago by Juke34 8.9k
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527
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Comment: Comment: genome annotation and GFF file formation
6 weeks ago by Juke34 8.9k
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737
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Answer: Answer: How can I extract 3'UTR of bacteria (Pseudomonas aeruginosa) without using R?
7 weeks ago by Juke34 8.9k
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328
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Answer: Answer: Need help with AUGUSTUS and AGAT for gene prediction and feature extraction, res
7 weeks ago by Juke34 8.9k
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531
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Comment: Comment: Awesome awesomeness bioinformatics
9 weeks ago by Juke34 8.9k
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531
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Comment: Comment: Awesome awesomeness bioinformatics
9 weeks ago by Juke34 8.9k
10
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4
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531
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Forum: Awesome awesomeness bioinformatics
bioinformatics Awesome
9 weeks ago by Juke34 8.9k
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2.1k
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Comment: Comment: GTF file
12 weeks ago by Juke34 8.9k
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2.1k
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Answer: Answer: GTF file
12 weeks ago by Juke34 8.9k
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3.7k
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Comment: Comment: Status of maker annotation
12 weeks ago by Juke34 8.9k
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2.1k
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Comment: Comment: GTF file
12 weeks ago by Juke34 8.9k
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2.1k
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Comment: Comment: GTF file
12 weeks ago by Juke34 8.9k
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2.1k
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Comment: Comment: GTF file
3 months ago by Juke34 8.9k
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4.7k
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Comment: Comment: How to annotate eukaryotic genome
4 months ago by Juke34 8.9k
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639
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Comment: Comment: Getting the coding_sequence.fasta from the .gff file from the AUGUSTUS gene pred
6 months ago by Juke34 8.9k
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639
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Comment: Comment: Getting the coding_sequence.fasta from the .gff file from the AUGUSTUS gene pred
6 months ago by Juke34 8.9k
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628
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Answer: Answer: Assume "yes" as the answer to any prompts with bioconda
7 months ago by Juke34 8.9k
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565
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Comment: Comment: Why are gene models from JGI non-sense when using AGAT to to extract proteins?
8 months ago by Juke34 8.9k
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863
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Answer: Answer: Genbank Bacteriophage Genome Submission - Internal stop codons in CDS sequences
8 months ago by Juke34 8.9k
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Answer: Answer: why there is an asterisk symbol at the end of each proteins sequences offasta fi
8 months ago by Juke34 8.9k
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11k
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Comment: Comment: Create de novo repeat library
8 months ago by Juke34 8.9k
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1.2k
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Answer: Answer: Intersect gene IDs list and GFF3 to get the annotation.
8 months ago by Juke34 8.9k
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642
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Answer: Answer: How can I get the sequences of the first 20nt of introns and the last 250nt of i
9 months ago by Juke34 8.9k
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1.7k
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Comment: Comment: Trying to wrap my head around Illumina paired end sequencing
10 months ago by Juke34 8.9k
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923
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Comment: Comment: Gemoma error with gff file
11 months ago by Juke34 8.9k
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0
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2.3k
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Comment: Comment: Assistance with Fungal Genome Annotation Using Maker and BLAST
13 months ago by Juke34 8.9k
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1
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2.3k
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Comment: Comment: Assistance with Fungal Genome Annotation Using Maker and BLAST
13 months ago by Juke34 8.9k
1
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1
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2.3k
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Comment: Comment: Assistance with Fungal Genome Annotation Using Maker and BLAST
13 months ago by Juke34 8.9k
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1
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1.4k
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Comment: Comment: file conversion from gtf to gff3 for evidence modeler
13 months ago by Juke34 8.9k
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1.4k
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Comment: Comment: file conversion from gtf to gff3 for evidence modeler
13 months ago by Juke34 8.9k
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1
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1.2k
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Answer: Answer: Adapters finder
13 months ago by Juke34 8.9k
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1.2k
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Comment: Comment: Converting GFF to GTF
13 months ago by Juke34 8.9k
2
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1
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1.0k
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Answer: Answer: Fastp
13 months ago by Juke34 8.9k
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1
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876
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Comment: Comment: Samtools mpileup for RNA Editing levels generating empty output file
13 months ago by Juke34 8.9k
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0
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442
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Comment: Comment: Luciferase T7 Control GTF file
13 months ago by Juke34 8.9k
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1
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1.7k
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Comment: Comment: Getting the overlap between two GTF files
14 months ago by Juke34 8.9k
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1
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1.3k
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Comment: Comment: how to identify uniq genes between two gff files.
14 months ago by Juke34 8.9k
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1.3k
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Answer: Answer: how to identify uniq genes between two gff files.
14 months ago by Juke34 8.9k
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1
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1.3k
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Answer: Answer: How to check RNAseq support for annotated genes?
14 months ago by Juke34 8.9k
1
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1
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2.3k
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Answer: Answer: Assistance with Fungal Genome Annotation Using Maker and BLAST
14 months ago by Juke34 8.9k
2
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2
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4.2k
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Answer: Answer: A list of technical advantages of Snakemake over Nextflow | Cloud solution for S
14 months ago by Juke34 8.9k
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1
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24k
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Comment: Comment: Is there a tool that sorts gtf files?
14 months ago by Juke34 8.9k
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1
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6.6k
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Answer: Answer: Convert bed12 to GFF
15 months ago by Juke34 8.9k
2
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0
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744
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Answer: Answer: MAKER: how to use RNAseq data to assist annotation?
15 months ago by Juke34 8.9k
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607
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Comment: Comment: How to set weight for merge legacy annotations
15 months ago by Juke34 8.9k
3
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1
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775
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Tutorial: Coordinate Systems and genomic variant description
coordinate-system HGVS normalization VCF
updated 16 months ago by 44k • written 16 months ago by 8.9k
982 results • Page 1 of 20
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