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Comment: Comment: RNAEditingIndexer
3.0 years ago by Juke34 8.9k
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Answer: Answer: How to extract promoter sequences from rice transcriptome.gtf file ?
3.0 years ago by Juke34 8.9k
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9.0k
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Answer: Answer: Explanation of ENSEMBL GTF features
3.0 years ago by Juke34 8.9k
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9.0k
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Comment: Comment: Explanation of ENSEMBL GTF features
3.0 years ago by Juke34 8.9k
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2.6k
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Comment: Comment: Package conflicts installing AGAT
3.0 years ago by Juke34 8.9k
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2.6k
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Comment: Comment: Package conflicts installing AGAT
3.0 years ago by Juke34 8.9k
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4.0k
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Comment: Comment: Simplify annotation file by collapsing gene isoforms into a single annotation pe
3.0 years ago by Juke34 8.9k
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1.7k
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Comment: Comment: Help for extraction of fasta sequences
3.1 years ago by Juke34 8.9k
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1.3k
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Comment: Comment: Error in gff file
3.1 years ago by Juke34 8.9k
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1
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1.3k
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Comment: Comment: Error in gff file
3.1 years ago by Juke34 8.9k
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1
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1.3k
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Answer: Answer: Error in gff file
3.1 years ago by Juke34 8.9k
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1.9k
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Answer: Answer: Running RepeatMasker with RepeatModeler database
3.1 years ago by Juke34 8.9k
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1
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671
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Overwrite Read sequences in bam with reads from Fastq
sam bam fastq
updated 3.1 years ago by 102k • written 3.1 years ago by 8.9k
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0
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1.6k
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Answer: Answer: Courses in RNAseq data
3.1 years ago by Juke34 8.9k
1
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1
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2.7k
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Answer: Answer: Issues installing vep
3.2 years ago by Juke34 8.9k
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2.1k
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Comment: Comment: bedtools getfasta concatenating sequences
3.2 years ago by Juke34 8.9k
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1
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2.1k
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Comment: Comment: bedtools getfasta concatenating sequences
3.2 years ago by Juke34 8.9k
1
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2
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3.9k
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Answer: Answer: Are there any alternatives to Liftoff - Mapping annotations (GFF/GTF) between as
updated 10 months ago by 147k • written 3.2 years ago by 8.9k
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860
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Answer: Answer: easy way to fetch out the surrounding CDS of a pair of given coordinates
3.2 years ago by Juke34 8.9k
3
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1
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6.7k
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Answer: Answer: Extracting exons and transcripts from gff3/gtf
3.2 years ago by Juke34 8.9k
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3.4k
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Comment: Comment: gffread error
3.2 years ago by Juke34 8.9k
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1
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3.4k
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Answer: Answer: gffread error
3.2 years ago by Juke34 8.9k
1
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1
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746
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Answer: Answer: Can the Non strand specify RNAseq data annotate genome?
3.2 years ago by Juke34 8.9k
2
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1
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3.9k
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Comment: Comment: Are there any alternatives to Liftoff - Mapping annotations (GFF/GTF) between as
3.2 years ago by Juke34 8.9k
1
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1
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3.9k
views
Answer: Answer: Are there any alternatives to Liftoff - Mapping annotations (GFF/GTF) between as
3.2 years ago by Juke34 8.9k
1
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0
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1.3k
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Answer: Answer: "gt gff3 -sortlines -tidy -retainids" reduce some lines
3.2 years ago by Juke34 8.9k
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1
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3.6k
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Comment: Comment: snpeff : wont recognize the gtf or gff3 files (runtime exception)
3.2 years ago by Juke34 8.9k
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2
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3.6k
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Comment: Comment: snpeff : wont recognize the gtf or gff3 files (runtime exception)
3.2 years ago by Juke34 8.9k
1
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0
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2.2k
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Comment: Comment: Blank output When converting GFF3 file to GTF using either gffread or AGAT
3.2 years ago by Juke34 8.9k
3
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1
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2.2k
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Answer: Answer: Blank output When converting GFF3 file to GTF using either gffread or AGAT
3.2 years ago by Juke34 8.9k
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0
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2.4k
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Answer: Answer: Looking tools for genes annotation
3.3 years ago by Juke34 8.9k
2
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0
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1.3k
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Comment: Comment: Pipeline version control system, pipeline storage
3.3 years ago by Juke34 8.9k
1
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1
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930
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Answer: Answer: Convert gff3 (or .out file) in RepeatMasker into tbl format
3.3 years ago by Juke34 8.9k
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1
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1.8k
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Answer: Answer: SRA/ENA library layout is inconsistent with the data source
3.3 years ago by Juke34 8.9k
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0
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2.3k
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Comment: Comment: GRCh37 GFF filter transcript isoforms by RefSeq Select tag or longest
3.3 years ago by Juke34 8.9k
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1
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2.3k
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Comment: Comment: GRCh37 GFF filter transcript isoforms by RefSeq Select tag or longest
3.3 years ago by Juke34 8.9k
0
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2
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2.3k
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Answer: Answer: GRCh37 GFF filter transcript isoforms by RefSeq Select tag or longest
3.3 years ago by Juke34 8.9k
1
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1
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2.2k
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Answer: Answer: How to fix GTF files by adding specific strings into empty gene_id ""
3.3 years ago by Juke34 8.9k
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0
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1.5k
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Answer: Answer: How to split big .faa file into smaller .faa files
3.3 years ago by Juke34 8.9k
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1
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2.9k
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Comment: Comment: How to trim a GFF3 file based on specific coordinates?
3.3 years ago by Juke34 8.9k
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0
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2.9k
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Comment: Comment: How to trim a GFF3 file based on specific coordinates?
3.3 years ago by Juke34 8.9k
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0
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4.7k
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Comment: Comment: Error when trying to import GTF files using rtracklayer's import function
3.3 years ago by Juke34 8.9k
0
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2
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2.9k
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Comment: Comment: How to trim a GFF3 file based on specific coordinates?
3.3 years ago by Juke34 8.9k
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0
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2.9k
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Comment: Comment: How to trim a GFF3 file based on specific coordinates?
3.3 years ago by Juke34 8.9k
0
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1
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2.9k
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Comment: Comment: How to trim a GFF3 file based on specific coordinates?
3.3 years ago by Juke34 8.9k
0
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1
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2.9k
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Comment: Comment: How to trim a GFF3 file based on specific coordinates?
3.3 years ago by Juke34 8.9k
2
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2
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2.9k
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Answer: Answer: How to trim a GFF3 file based on specific coordinates?
3.3 years ago by Juke34 8.9k
0
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0
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686
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Answer: Answer: How do I extract predicted genes from annotation from MAKER-P?
3.3 years ago by Juke34 8.9k
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0
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3.2k
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Comment: Comment: Render Rmarkdown in nextflow
3.4 years ago by Juke34 8.9k
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0
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1.9k
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Answer: Answer: homebrew Vs bioconda
3.4 years ago by Juke34 8.9k
982 results • Page 5 of 20
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