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Comment: Comment: bcl-convert multithreading optiisation
3.4 years ago by Juke34 8.9k
2
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3
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2.1k
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bcl-convert multithreading optimisation
bcl-convert bcl2fastq threading
20 months ago by Juke34 8.9k
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1
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19k
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Answer: Answer: gff3 to CDS fasta
3.4 years ago by Juke34 8.9k
1
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1
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5.8k
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Comment: Comment: Adding Introns To Gff3 Format?
3.4 years ago by Juke34 8.9k
2
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0
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2.0k
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Answer: Answer: Weird characters in yeast reference gff3
3.4 years ago by Juke34 8.9k
1
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0
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7.7k
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Comment: Comment: gene set filter/selection for training ab initio annotation tools
3.4 years ago by Juke34 8.9k
0
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1
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7.7k
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Comment: Comment: gene set filter/selection for training ab initio annotation tools
3.4 years ago by Juke34 8.9k
0
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0
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7.7k
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Comment: Comment: gene set filter/selection for training ab initio annotation tools
3.4 years ago by Juke34 8.9k
0
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1
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7.7k
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Comment: Comment: gene set filter/selection for training ab initio annotation tools
3.4 years ago by Juke34 8.9k
0
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0
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1.5k
views
Comment: Comment: Using RefSeq gene annotation file to determine gene lengths
3.4 years ago by Juke34 8.9k
1
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0
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1.7k
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Comment: Comment: generating transcript to gene mapping with unhelpful GFF3 file
3.4 years ago by Juke34 8.9k
1
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1
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1.7k
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Comment: Comment: generating transcript to gene mapping with unhelpful GFF3 file
3.4 years ago by Juke34 8.9k
0
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0
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960
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Comment: Comment: extract the ids and key values
3.4 years ago by Juke34 8.9k
0
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0
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1.2k
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Comment: Comment: How to remove repeated sequence region in Interproscan .gff3 with many ORFs?
3.4 years ago by Juke34 8.9k
0
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1
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1.5k
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Comment: Comment: To retrieve the transcript from gff file with the longest isoform
3.4 years ago by Juke34 8.9k
1
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0
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5.6k
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Comment: Comment: Problem with featureCounts using a GTF generated by me
3.4 years ago by Juke34 8.9k
0
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0
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4.7k
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Comment: Comment: how to get transcript.fasta from gff file
3.4 years ago by Juke34 8.9k
1
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0
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1.4k
views
Tutorial: Slurm and parallelization
slurm
3.5 years ago by Juke34 8.9k
6
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12
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4.2k
views
Trim bam file reads to remove all nucleotide over a certain length
bam trimming
updated 3.5 years ago by 147k • written 3.5 years ago by 8.9k
0
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1
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4.2k
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Answer: Answer: Trim bam file reads to remove all nucleotide over a certain length
3.5 years ago by Juke34 8.9k
1
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0
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2.3k
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Answer: Answer: Trim bam file reads to the same length
3.5 years ago by Juke34 8.9k
0
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0
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4.2k
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Comment: Comment: Trim bam file reads to remove all nucleotide over a certain length
3.5 years ago by Juke34 8.9k
0
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0
replies
4.2k
views
Comment: Comment: Trim bam file reads to remove all nucleotide over a certain length
3.5 years ago by Juke34 8.9k
1
vote
0
replies
4.2k
views
Comment: Comment: Trim bam file reads to remove all nucleotide over a certain length
3.5 years ago by Juke34 8.9k
0
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2
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4.2k
views
Comment: Comment: Trim bam file reads to remove all nucleotide over a certain length
3.5 years ago by Juke34 8.9k
0
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0
replies
2.3k
views
Comment: Comment: Trim bam file reads to the same length
3.5 years ago by Juke34 8.9k
0
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0
replies
777
views
Comment: Comment: aligning reads against shorter region
3.5 years ago by Juke34 8.9k
1
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1
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2.0k
views
Answer: Answer: Extract transcript fasta using gff
3.5 years ago by Juke34 8.9k
1
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2
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777
views
aligning reads against shorter region
alingment Bowtie2
3.5 years ago by Juke34 8.9k
2
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0
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16k
views
Answer: Answer: How to trim Nanopore reads. Please suggest a tool.
3.5 years ago by Juke34 8.9k
0
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1
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988
views
Answer: Answer: Subset gff with non-unique seqid
3.5 years ago by Juke34 8.9k
1
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0
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5.6k
views
Comment: Comment: Problem with featureCounts using a GTF generated by me
3.5 years ago by Juke34 8.9k
3
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0
replies
1.2k
views
Answer: Answer: Bedtools Intersect
3.5 years ago by Juke34 8.9k
1
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0
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2.0k
views
Comment: Comment: Genome annotation file GFF3 and GTF same? interchangeable?
3.5 years ago by Juke34 8.9k
2
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1
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2.0k
views
Answer: Answer: Genome annotation file GFF3 and GTF same? interchangeable?
3.5 years ago by Juke34 8.9k
0
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0
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35k
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Comment: Comment: How Do You Manage Your Files & Directories For Your Projects ?
3.5 years ago by Juke34 8.9k
0
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0
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1.2k
views
Answer: Answer: Transfer annotation from fasta headers to associated gff
3.5 years ago by Juke34 8.9k
0
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0
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3.5k
views
Answer: Answer: Maker Failed while doing repeat masking
3.5 years ago by Juke34 8.9k
1
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2
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1.2k
views
Answer: Answer: Difference between fCDS and CDS
3.5 years ago by Juke34 8.9k
0
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0
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2.3k
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Comment: Comment: Merge 2 GTF using agat avoiding overlapping
3.5 years ago by Juke34 8.9k
0
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1
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6.3k
views
Comment: Comment: How to combine 2 incomplete GTF
3.5 years ago by Juke34 8.9k
1
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1
reply
1.4k
views
Answer: Answer: gffread doesn't convert gff to gtf (blank file)
3.5 years ago by Juke34 8.9k
1
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1
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1.9k
views
Comment: Comment: Starting a collective twitter account "Bioinformatician Underhood"
3.6 years ago by Juke34 8.9k
1
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1
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1.9k
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Comment: Comment: Starting a collective twitter account "Bioinformatician Underhood"
3.6 years ago by Juke34 8.9k
0
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0
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812
views
Comment: Comment: Annovar Exonic label
3.6 years ago by Juke34 8.9k
3
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0
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3.3k
views
Answer: Answer: Why is human genome FASTA file on GENCODE much smaller than that on ENSEMBL?
3.6 years ago by Juke34 8.9k
0
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2
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812
views
Annovar Exonic label
annovar
3.6 years ago by Juke34 8.9k
1
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2
replies
6.3k
views
Comment: Comment: How to combine 2 incomplete GTF
3.6 years ago by Juke34 8.9k
1
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1
reply
6.3k
views
Comment: Comment: How to combine 2 incomplete GTF
3.6 years ago by Juke34 8.9k
1
vote
1
reply
6.3k
views
Comment: Comment: How to combine 2 incomplete GTF
3.6 years ago by Juke34 8.9k
982 results • Page 6 of 20
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