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Count Matrix normalisation for downstream analysis and for creating heatmap of targeted genes
count-matrix
stringtie
normalisation
statistics
transcriptomics
updated 9 months ago by
Ram
44k • written 19 months ago by
Vikram
• 0
1
vote
1
reply
594
views
Featurecounts countmatrix creation
featurecounts
DEA
bamfile
updated 19 months ago by
rpolicastro
13k • written 19 months ago by
Vikram
• 0
0
votes
0
replies
375
views
Calculating Correlation between genes of different treatments
pearson-correlation
statistics
updated 18 months ago by
Ram
44k • written 19 months ago by
Vikram
• 0
1
vote
1
reply
703
views
FeatureCounts tool
GFF3
FeatureCounts
annotation
updated 19 months ago by
Istvan Albert
101k • written 19 months ago by
Vikram
• 0
0
votes
1
reply
1.0k
views
Comment:
Comment: In differential expression analysis using ballgown, how do we know that genes a
19 months ago by
Vikram
• 0
0
votes
3
replies
1.0k
views
In differential expression analysis using ballgown, how do we know that genes are upregulated or downregulated in control or treatment?
differential-expression-analysis
R
ballgown
updated 19 months ago by
ATpoint
85k • written 19 months ago by
Vikram
• 0
0
votes
1
reply
436
views
Ballgown
Ballgown
differential-expression-analysis
R
updated 19 months ago by
Ram
44k • written 19 months ago by
Vikram
• 0
0
votes
0
replies
404
views
correlation heatmap of RT-PCR data
RT-PCR
Correlation
Ct-value
heatmap
20 months ago by
Vikram
• 0
0
votes
2
replies
835
views
HISAT2
aligner
HISAT2
updated 21 months ago by
ATpoint
85k • written 21 months ago by
Vikram
• 0
0
votes
1
reply
557
views
differential expression analysis
RT-PCR
updated 21 months ago by
Ram
44k • written 21 months ago by
Vikram
• 0
0
votes
0
replies
734
views
Comment:
Comment: Linux server Vs Linux pc
21 months ago by
Vikram
• 0
1
vote
3
replies
734
views
Linux server Vs Linux pc
Linux
server
analysis
Transcriptomic
updated 21 months ago by
Joe
21k • written 21 months ago by
Vikram
• 0
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