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954
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Count Matrix normalisation for downstream analysis and for creating heatmap of targeted genes
count-matrix
stringtie
normalisation
statistics
transcriptomics
updated 16 months ago by
Ram
45k • written 2.1 years ago by
Vikram
• 0
1
vote
1
reply
717
views
Featurecounts countmatrix creation
featurecounts
DEA
bamfile
updated 2.2 years ago by
rpolicastro
13k • written 2.2 years ago by
Vikram
• 0
0
votes
0
replies
448
views
Calculating Correlation between genes of different treatments
pearson-correlation
statistics
updated 2.1 years ago by
Ram
45k • written 2.2 years ago by
Vikram
• 0
1
vote
1
reply
845
views
FeatureCounts tool
GFF3
FeatureCounts
annotation
updated 2.2 years ago by
Istvan Albert
102k • written 2.2 years ago by
Vikram
• 0
0
votes
1
reply
1.2k
views
Comment:
Comment: In differential expression analysis using ballgown, how do we know that genes a
2.2 years ago by
Vikram
• 0
0
votes
3
replies
1.2k
views
In differential expression analysis using ballgown, how do we know that genes are upregulated or downregulated in control or treatment?
differential-expression-analysis
R
ballgown
updated 2.2 years ago by
ATpoint
88k • written 2.2 years ago by
Vikram
• 0
0
votes
1
reply
565
views
Ballgown
Ballgown
differential-expression-analysis
R
updated 2.2 years ago by
Ram
45k • written 2.2 years ago by
Vikram
• 0
0
votes
0
replies
497
views
correlation heatmap of RT-PCR data
RT-PCR
Correlation
Ct-value
heatmap
2.3 years ago by
Vikram
• 0
0
votes
2
replies
984
views
HISAT2
aligner
HISAT2
updated 2.3 years ago by
ATpoint
88k • written 2.3 years ago by
Vikram
• 0
0
votes
1
reply
718
views
differential expression analysis
RT-PCR
updated 2.3 years ago by
Ram
45k • written 2.3 years ago by
Vikram
• 0
0
votes
0
replies
932
views
Comment:
Comment: Linux server Vs Linux pc
2.3 years ago by
Vikram
• 0
1
vote
3
replies
932
views
Linux server Vs Linux pc
Linux
server
analysis
Transcriptomic
updated 2.3 years ago by
Joe
22k • written 2.3 years ago by
Vikram
• 0
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