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Comment: Comment: Questions regarding proprocess for raw data and usage of FastQC
updated 2.1 years ago by 44k • written 9.7 years ago by ▴ 810
0
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1
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3.8k
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Comment: Comment: Questions regarding proprocess for raw data and usage of FastQC
updated 2.1 years ago by 44k • written 9.7 years ago by ▴ 810
0
votes
1
reply
2.4k
views
Comment: Comment: how to count un-mapped reads at specific position using samtools?
updated 2.1 years ago by 44k • written 9.8 years ago by ▴ 810
1
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3
replies
2.4k
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how to count un-mapped reads at specific position using samtools?
sequencing genome sequence
updated 2.1 years ago by 44k • written 9.8 years ago by ▴ 810
5
votes
5
replies
5.1k
views
Fusion with strand orientation
alignment next-gen sequence
updated 3.0 years ago by 44k • written 10.3 years ago by ▴ 810
3
votes
1
reply
2.3k
views
Problems with samtools mpileup
alignment next-gen-sequencing
updated 2.0 years ago by 44k • written 9.8 years ago by ▴ 810
1
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1
reply
5.1k
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Comment: C: How to interpret vcf FORMAT more accurately?
9.8 years ago by mangfu100 ▴ 810
5
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4
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5.1k
views
How to interpret vcf FORMAT more accurately?
next-gen genome alignment
updated 2.0 years ago by 44k • written 9.8 years ago by ▴ 810
0
votes
0
replies
1.9k
views
Questions regarding extracting ref or non-ref allele counts in bam files.
alignment next-gen-sequencing
updated 2.0 years ago by 44k • written 9.8 years ago by ▴ 810
3
votes
1
reply
3.9k
views
How to interpret mutation mapper in CBioportal for mutation?
sequence next-gen-sequencing
updated 2.6 years ago by 44k • written 9.8 years ago by ▴ 810
9
votes
5
replies
8.8k
views
RNA-seq vs. Microarray
next-gen-sequencing alignment
updated 19 months ago by • 0 • written 9.8 years ago by ▴ 810
19
votes
8
replies
17k
views
Why does the BLAST use E-value instead of p-value?
sequencing alignment
updated 2.6 years ago by 44k • written 9.8 years ago by ▴ 810
4
votes
2
replies
8.7k
views
Questions in BLASTn and BLASTp
genome sequencing
updated 3.9 years ago by 44k • written 9.9 years ago by ▴ 810
0
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0
replies
4.7k
views
Comment: C: Plot Read Count Over Exons For A Gene
9.9 years ago by mangfu100 ▴ 810
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0
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2.3k
views
Comment: Comment: Where can I get the genelist in Oncoscan?
updated 2.7 years ago by 44k • written 9.9 years ago by ▴ 810
3
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2
replies
2.3k
views
Where can I get the genelist in Oncoscan?
genome alignment next-gen
updated 2.7 years ago by 44k • written 9.9 years ago by ▴ 810
7
votes
1
reply
2.5k
views
How to identify structural variants manually?
alignment gene next-gen
updated 3.2 years ago by 44k • written 10.5 years ago by ▴ 810
3
votes
2
replies
2.9k
views
Does read count ratio follow Gaussian distribution?
alignment next-gen-sequencing
updated 2.9 years ago by 44k • written 10.2 years ago by ▴ 810
17
votes
2
replies
13k
views
Question about gens name starting "LOC~"
sequencing genome
updated 2.9 years ago by 44k • written 10.0 years ago by ▴ 810
3
votes
1
reply
2.9k
views
Question about allelic fraction mutation
next-gen-sequencing genome
updated 2.9 years ago by 44k • written 10.1 years ago by ▴ 810
4
votes
1
reply
2.1k
views
Questions : Data management of whole exome sequencing
next-gen-sequencing genome
updated 2.9 years ago by 44k • written 10.1 years ago by ▴ 810
0
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0
replies
1.6k
views
Comment: C: Questions regarding utilizing UCSC genome browser
10.1 years ago by mangfu100 ▴ 810
2
votes
2
replies
1.6k
views
Questions regarding utilizing UCSC genome browser
next-gen sequencing alignment
updated 10.1 years ago by 44k • written 10.1 years ago by ▴ 810
4
votes
2
replies
2.9k
views
Question in Database of Genomic variants
alignment next-gen sequence
updated 2.9 years ago by 44k • written 10.1 years ago by ▴ 810
6
votes
6
replies
2.8k
views
Bedtools - Errors in coveragedBed
next-gen sequencing sequence
updated 10.2 years ago by 15k • written 10.2 years ago by ▴ 810
0
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1
reply
2.8k
views
Comment: C: Bedtools - Errors in coveragedBed
10.2 years ago by mangfu100 ▴ 810
0
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0
replies
1.4k
views
Comment: Comment: Questions about some terminologies.
updated 3.0 years ago by 44k • written 10.2 years ago by ▴ 810
0
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1
reply
1.4k
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Comment: C: Questions about some terminologies.
10.2 years ago by mangfu100 ▴ 810
2
votes
4
replies
1.4k
views
Questions about some terminologies.
alignment next-gen sequence
updated 3.0 years ago by 44k • written 10.2 years ago by ▴ 810
0
votes
0
replies
2.6k
views
Question in ExomeDepth
gene next-gen-sequencing
updated 3.0 years ago by 44k • written 10.2 years ago by ▴ 810
2
votes
1
reply
3.2k
views
Have anyone been experienced ExomeCNV?
alignment next-gen-sequencing
updated 3.0 years ago by 44k • written 10.2 years ago by ▴ 810
1
vote
2
replies
2.3k
views
Have anyone been experienced Socrates ?
alignment next-gen-sequencing
updated 3.0 years ago by 44k • written 10.2 years ago by ▴ 810
0
votes
0
replies
2.3k
views
Comment: Comment: Have anyone been experienced Socrates ?
updated 3.0 years ago by 44k • written 10.2 years ago by ▴ 810
0
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1
reply
4.4k
views
Comment: C: Question about non-polymorphic site and flanking sequence.
10.2 years ago by mangfu100 ▴ 810
0
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0
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4.4k
views
Comment: C: Question about non-polymorphic site and flanking sequence.
10.2 years ago by mangfu100 ▴ 810
11
votes
6
replies
4.4k
views
Question about non-polymorphic site and flanking sequence.
sequencing alignment gene
updated 3.0 years ago by 44k • written 10.2 years ago by ▴ 810
11
votes
3
replies
2.1k
views
Question about downstream terminology.
sequencing alignment next-gen
updated 3.0 years ago by 44k • written 10.2 years ago by ▴ 810
4
votes
1
reply
3.3k
views
Copy number variation detection tools within exome sequencing
gene next-gen-sequencing
updated 3.0 years ago by 44k • written 10.2 years ago by ▴ 810
0
votes
0
replies
5.1k
views
Comment: Comment: Fusion with strand orientation
updated 3.0 years ago by 44k • written 10.2 years ago by ▴ 810
0
votes
0
replies
1.8k
views
Comment: C: Have anyone experienced CREST tools?
10.2 years ago by mangfu100 ▴ 810
7
votes
1
reply
4.6k
views
Samtool flag with meaning of -F
alignment next-gen sequence
updated 3.0 years ago by 44k • written 10.3 years ago by ▴ 810
13
votes
2
replies
3.0k
views
Question about sam flags.
alignment next-gen-sequencing
updated 3.0 years ago by 44k • written 10.3 years ago by ▴ 810
2
votes
1
reply
2.5k
views
Is annovar suitable for structural rearrangements instead of SNPs or INDEL?
alignment next-gen-sequencing
updated 3.0 years ago by 44k • written 10.3 years ago by ▴ 810
3
votes
2
replies
3.1k
views
How to identify whether this is pseudo gene or not?
next-gen-sequencing genome
updated 3.0 years ago by 44k • written 10.3 years ago by ▴ 810
0
votes
1
reply
9.6k
views
Comment: C: How to check the bam file of read quality with graphically visual?
10.3 years ago by mangfu100 ▴ 810
3
votes
1
reply
2.5k
views
What is a non-diploid genome and its importance?
next-gen genome
updated 3.1 years ago by 44k • written 10.4 years ago by ▴ 810
0
votes
2
replies
5.1k
views
Comment: C: Fusion with strand orientation
10.3 years ago by mangfu100 ▴ 810
0
votes
1
reply
3.5k
views
Comment: Comment: What is reciprocal partners?
updated 3.0 years ago by 44k • written 10.3 years ago by ▴ 810
3
votes
3
replies
3.5k
views
What is reciprocal partners?
sequencing
updated 3.0 years ago by 44k • written 10.3 years ago by ▴ 810
0
votes
1
reply
2.1k
views
Comment: Comment: Question about 5' coordinate and 3' coordinate.
updated 3.0 years ago by 44k • written 10.3 years ago by ▴ 810
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