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33
votes
10
replies
37k
views
8 follow
Convert between RefSeq and Ensembl Transcript?
refseq ensembl
updated 16 months ago by 44k • written 10.4 years ago by ▴ 540
1
vote
1
reply
3.4k
views
RefSeq Version Numbers/Mapping File
transcript mapping version refseq protein
updated 2.6 years ago by 44k • written 9.8 years ago by ▴ 540
0
votes
1
reply
2.6k
views
Aligning UniProt Canonical Sequences With Their Isoform Sequences
uniprot sequence canonical isoform align
updated 9.6 years ago by ★ 2.4k • written 9.6 years ago by ▴ 540
0
votes
3
replies
3.1k
views
How to tell if a RefSeq or UniProt protein identifier is human?
refseq uniprot human protein
updated 2.4 years ago by 44k • written 9.6 years ago by ▴ 540
0
votes
2
replies
1.9k
views
Protein Sequence Alignment
uniprot refseq protein sequence alignment
updated 9.8 years ago by ★ 2.8k • written 9.8 years ago by ▴ 540
3
votes
4
replies
2.8k
views
Data File Which Maps Between Gene Names and Uniprot Protein IDs
gene-name mapping uniprot
updated 2.6 years ago by 44k • written 9.8 years ago by ▴ 540
2
votes
2
replies
3.3k
views
Ensembl Gene Sequence Data File?
data sequence ensg ensembl fasta
updated 2.7 years ago by 44k • written 9.9 years ago by ▴ 540
0
votes
5
replies
4.9k
views
Data file to convert from Ensembl Transcript Identifiers (ENST) to RefSeq transcript Identifiers (NM_*)
refseq ensembl
updated 2.8 years ago by 44k • written 10.0 years ago by ▴ 540
3
votes
1
reply
2.2k
views
The nucleotides on ENST00000347310 and ENST00000425614 do not agree on the same chromosomal position (67240275)
position nucleotide ensembl grch38 base
updated 2.8 years ago by 44k • written 10.0 years ago by ▴ 540
0
votes
0
replies
3.8k
views
Comment: Comment: Does RefSeq DB have a CDS file for its transcripts?
updated 2.7 years ago by 44k • written 10.0 years ago by ▴ 540
1
vote
2
replies
3.8k
views
Does RefSeq DB have a CDS file for its transcripts?
cds refseq nm coding-sequence
updated 2.7 years ago by 44k • written 10.0 years ago by ▴ 540
1
vote
2
replies
3.8k
views
How does RefSeq get their transcript sequences?
atg sequence refseq nm identifier
updated 2.7 years ago by 44k • written 10.0 years ago by ▴ 540
0
votes
1
reply
3.3k
views
Comment: Comment: How does RefSeq Calculate their Positions?
updated 3.0 years ago by 44k • written 10.0 years ago by ▴ 540
2
votes
3
replies
3.3k
views
How does RefSeq Calculate their Positions?
mutation position ensembl refseq
updated 3.0 years ago by 44k • written 10.0 years ago by ▴ 540
8
votes
3
replies
3.9k
views
12.2% of protein coding transcripts in GRCh38.cds.all.fa (from Ensembl db) don't start with 'ATG'. Why is this?
grch38 cds transcript ensembl
updated 2.8 years ago by 44k • written 10.0 years ago by ▴ 540
5
votes
3
replies
5.7k
views
EnsGene.txt (UCSC/hg19) and Homo_sapiens.GRCh38.76.gtf (GRCH38) positions do not match
ucsc gtf match grch38 position
updated 2.9 years ago by 44k • written 10.2 years ago by ▴ 540
120
votes
8
replies
81k
views
GRCh37/38(NCBI) vs hg19/hg38(UCSC)
ncbi ucsc grch38 hg38
updated 2.9 years ago by 44k • written 10.2 years ago by ▴ 540
3
votes
5
replies
3.2k
views
What do UCSC identifiers physically represent?
identifier ucsc uc ensembl
updated 2.9 years ago by 44k • written 10.2 years ago by ▴ 540
2
votes
1
reply
2.4k
views
Does Uniprot Still Use GRCh37 annotations?
uniprot ensembl GRCh37 annotation
updated 2.9 years ago by 44k • written 10.2 years ago by ▴ 540
0
votes
1
reply
81k
views
Comment: Comment: GRCh37/38(NCBI) vs hg19/hg38(UCSC)
updated 2.9 years ago by 44k • written 10.2 years ago by ▴ 540
1
vote
1
reply
81k
views
Comment: Comment: GRCh37/38(NCBI) vs hg19/hg38(UCSC)
updated 2.9 years ago by 44k • written 10.2 years ago by ▴ 540
2
votes
4
replies
3.5k
views
Question about UniProt Isoforms
uniprot isoform ensembl enst
updated 3.0 years ago by 44k • written 10.4 years ago by ▴ 540
0
votes
1
reply
37k
views
Comment: Comment: Convert between RefSeq and Ensembl Transcript?
updated 3.0 years ago by 44k • written 10.4 years ago by ▴ 540
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