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0
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0
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1.7k
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Comment: C: Hi-C, inferring contacts from normalized matrixes
4.5 years ago by R.Blues ▴ 180
2
votes
2
replies
1.8k
views
Getting RNA sequence from RNA-Seq reads; some questions
RNA-Seq SNP sequence rna
updated 6.4 years ago by 20 • written 9.2 years ago by ▴ 180
0
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0
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4.0k
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Answer: A: Reading Clariom D Human CEL files results in missing CDF enviroment error
6.7 years ago by R.Blues ▴ 180
1
vote
4
replies
3.4k
views
Variant Effect Predictor parameters for custom gff and fasta
VEP SNP fasta gff
updated 7.0 years ago by ▴ 30 • written 8.4 years ago by ▴ 180
0
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2
replies
1.7k
views
Hi-C, inferring contacts from normalized matrixes
chromatine Hi-C
7.6 years ago by R.Blues ▴ 180
5
votes
3
replies
1.5k
views
Obtain all ncDNA sequences using a GTF
genome sequence
8.0 years ago by R.Blues ▴ 180
3
votes
4
replies
5.2k
views
Pseudoautosomal regions (PAR) coordinates in different species, where and how?
sequence genome
updated 8.2 years ago by 5.8k • written 8.5 years ago by ▴ 180
1
vote
0
replies
1.4k
views
Alternative splicing database - Pathogenies
database splicing pathogenies
8.4 years ago by R.Blues ▴ 180
0
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0
replies
4.3k
views
Comment: C: How to identify TSS sites from bacterial RNA-Seq data?
8.4 years ago by R.Blues ▴ 180
8
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7
replies
4.3k
views
How to identify TSS sites from bacterial RNA-Seq data?
TSS RNA-Seq
updated 8.4 years ago by ★ 2.9k • written 8.5 years ago by ▴ 180
1
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0
replies
4.3k
views
Comment: C: How to identify TSS sites from bacterial RNA-Seq data?
8.4 years ago by R.Blues ▴ 180
0
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0
replies
4.3k
views
Comment: C: How to identify TSS sites from bacterial RNA-Seq data?
8.4 years ago by R.Blues ▴ 180
0
votes
0
replies
5.2k
views
Comment: C: Pseudoautosomal regions (PAR) coordinates in different species, where and how?
8.5 years ago by R.Blues ▴ 180
0
votes
1
reply
3.0k
views
Comment: C: Finding motifs for TFs binding sites in my sequences
8.6 years ago by R.Blues ▴ 180
3
votes
3
replies
3.0k
views
Finding motifs for TFs binding sites in my sequences
TFs binding sites
updated 8.6 years ago by 5.8k • written 8.6 years ago by ▴ 180
6
votes
9
replies
6.3k
views
Detecting bacterial TSS from RNA-Seq data, how?
RNA-Seq bacteria TSS
updated 8.6 years ago by 20 • written 8.8 years ago by ▴ 180
12
votes
8
replies
2.8k
views
Having trouble with biomaRt, getBM and chromosome_end
R biomart
updated 8.6 years ago by ★ 2.0k • written 8.6 years ago by ▴ 180
0
votes
2
replies
2.8k
views
Comment: C: Having trouble with biomaRt, getBM and chromosome_end
8.6 years ago by R.Blues ▴ 180
0
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1
reply
2.8k
views
Comment: C: Having trouble with biomaRt, getBM and chromosome_end
8.6 years ago by R.Blues ▴ 180
0
votes
1
reply
2.1k
views
Comment: C: Finding conserved non-coding sequences
8.7 years ago by R.Blues ▴ 180
0
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3
replies
2.1k
views
Finding conserved non-coding sequences
next-gen sequence genome
8.7 years ago by R.Blues ▴ 180
0
votes
0
replies
6.3k
views
Comment: C: Detecting bacterial TSS from RNA-Seq data, how?
8.8 years ago by R.Blues ▴ 180
2
votes
1
reply
6.3k
views
Comment: C: Detecting bacterial TSS from RNA-Seq data, how?
8.8 years ago by R.Blues ▴ 180
0
votes
1
reply
3.6k
views
About Cuffcompare output
cufflinks cuffcompare output RNA-Seq transcripts
updated 8.8 years ago by 20 • written 9.1 years ago by ▴ 180
0
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0
replies
2.5k
views
Comment: C: Genome assembly and how to determinate indels
9.0 years ago by R.Blues ▴ 180
0
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1
reply
2.5k
views
Comment: C: Genome assembly and how to determinate indels
9.0 years ago by R.Blues ▴ 180
0
votes
1
reply
2.5k
views
Comment: C: Genome assembly and how to determinate indels
9.0 years ago by R.Blues ▴ 180
3
votes
8
replies
2.5k
views
Genome assembly and how to determinate indels
NGS genome indel Assembly sequencing
9.0 years ago by R.Blues ▴ 180
0
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1
reply
2.5k
views
Comment: C: Genome assembly and how to determinate indels
9.0 years ago by R.Blues ▴ 180
0
votes
1
reply
2.2k
views
Comment: C: Operon prediction in RNA-Seq - How?
9.1 years ago by R.Blues ▴ 180
1
vote
3
replies
2.2k
views
Operon prediction in RNA-Seq - How?
operon RNA-Seq R CONDOP
updated 9.1 years ago by 10k • written 9.1 years ago by ▴ 180
0
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0
replies
1.8k
views
Comment: C: Getting RNA sequence from RNA-Seq reads; some questions
9.2 years ago by R.Blues ▴ 180
0
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0
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2.9k
views
Comment: C: Three microarray questions: Oligo package, custom microarrays and makeContrasts
9.2 years ago by R.Blues ▴ 180
2
votes
2
replies
2.9k
views
Three microarray questions: Oligo package, custom microarrays and makeContrasts
R microarray oligo gene analysis
updated 9.2 years ago by ▴ 40 • written 9.3 years ago by ▴ 180
0
votes
2
replies
3.3k
views
Which are the most well-known transcription factors in human? (interested in their GO terms)
go term transcription factor human genome
updated 10.5 years ago by 27k • written 10.6 years ago by ▴ 180
0
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0
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6.0k
views
Comment: Comment: How to correlate genes to transcription factors in RNA-Seq data?
updated 3.3 years ago by 45k • written 10.5 years ago by ▴ 180
8
votes
4
replies
6.0k
views
How to correlate genes to transcription factors in RNA-Seq data?
gene RNA-Seq
updated 3.3 years ago by 45k • written 10.6 years ago by ▴ 180
2
votes
1
reply
4.5k
views
Comment: C: List of genes to list of pathways (no enrichment)
10.8 years ago by R.Blues ▴ 180
0
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0
replies
4.8k
views
Comment: C: cn.mops for WES, what am I doing wrong?
10.9 years ago by R.Blues ▴ 180
10
votes
8
replies
4.5k
views
6 follow
List of genes to list of pathways (no enrichment)
genes pathways python reactome kegg
updated 3.5 years ago by 45k • written 10.9 years ago by ▴ 180
0
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0
replies
4.5k
views
Comment: C: List of genes to list of pathways (no enrichment)
10.9 years ago by R.Blues ▴ 180
4
votes
5
replies
4.8k
views
cn.mops for WES, what am I doing wrong?
exome cn.mops cnv WES
updated 3.5 years ago by 45k • written 10.9 years ago by ▴ 180
0
votes
1
reply
4.8k
views
Comment: C: cn.mops for WES, what am I doing wrong?
10.9 years ago by R.Blues ▴ 180
0
votes
1
reply
5.0k
views
Comment: Comment: Python and SNP Databases, how?
updated 3.5 years ago by 45k • written 10.9 years ago by ▴ 180
3
votes
3
replies
5.0k
views
Python and SNP Databases, how?
Databases SNP Python
updated 3.5 years ago by 45k • written 10.9 years ago by ▴ 180
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