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Value of short kmer lengths with 300PE sequencing
metagenomics sequencing spades microbiome
5 months ago by Bryan ▴ 10
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Comment: Comment: Removing adapter/primer sequence from reads while keeping flanking regions
7 months ago by Bryan ▴ 10
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Answer: Answer: Removing adapter/primer sequence from reads while keeping flanking regions
7 months ago by Bryan ▴ 10
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11
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1.1k
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Removing adapter/primer sequence from reads while keeping flanking regions
trimming fasta cutadapt BBDuk fastq
7 months ago by Bryan ▴ 10
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1
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495
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filtering SAM/BAM to remove hits spanning short combined alignment lengths and low counts
align bbmap metagenomics
updated 12 months ago by ▴ 40 • written 12 months ago by ▴ 10
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952
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Iterative normalization for large files using BBnorm
BBTools BBNorm NovaSeq metagenomics normalization
17 months ago by Bryan ▴ 10
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952
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Answer: Answer: Iterative normalization for large files using BBnorm
17 months ago by Bryan ▴ 10
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Answer: Answer: Genome assembly statistical tools
18 months ago by Bryan ▴ 10
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1.2k
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BBmap params for accurate MAG relative abundance estimation?
abundance BBmap alignment metagenomics
updated 18 months ago by 147k • written 18 months ago by ▴ 10
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