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How to normalise the RNAseq data without spike in?
Nanopore spike-in RNAseq
3 months ago by Mo ▴ 50
0
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1
reply
730
views
Comment: Comment: How to normalise RNA seq data from two independent experiments to the same scale
11 months ago by Mo ▴ 50
0
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1
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730
views
Comment: Comment: How to normalise RNA seq data from two independent experiments to the same scale
11 months ago by Mo ▴ 50
1
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5
replies
730
views
How to normalise RNA seq data from two independent experiments to the same scale.
RNAseq
updated 11 months ago by ★ 1.8k • written 11 months ago by ▴ 50
4
votes
6
replies
2.9k
views
6 follow
How to discard alignments from SAM/BAM file that have mismatches
BAM SAM minimap nanopore
updated 16 months ago by 20k • written 20 months ago by ▴ 50
0
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0
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823
views
Comment: Comment: How to sort cd-hit-est cluster file
16 months ago by Mo ▴ 50
1
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4
replies
823
views
How to sort cd-hit-est cluster file
sort cd-hit-est
16 months ago by Mo ▴ 50
0
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0
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823
views
Comment: Comment: How to sort cd-hit-est cluster file
17 months ago by Mo ▴ 50
0
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0
replies
680
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Comment: Comment: Modify the code to take most abundant reads from a cluster and process it.
17 months ago by Mo ▴ 50
0
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2
replies
680
views
Modify the code to take most abundant reads from a cluster and process it.
cd-hit-est clustering
17 months ago by Mo ▴ 50
0
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0
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3.5k
views
Comment: Comment: Which minimap2 parameters to set while performing mapping to avoid such mismatch
17 months ago by Mo ▴ 50
2
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1
reply
3.5k
views
Comment: Comment: Which minimap2 parameters to set while performing mapping to avoid such mismatch
17 months ago by Mo ▴ 50
0
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0
replies
3.5k
views
Comment: Comment: Which minimap2 parameters to set while performing mapping to avoid such mismatch
17 months ago by Mo ▴ 50
0
votes
1
reply
3.5k
views
Comment: Comment: Which minimap2 parameters to set while performing mapping to avoid such mismatch
17 months ago by Mo ▴ 50
7
votes
9
replies
3.5k
views
Which minimap2 parameters to set while performing mapping to avoid such mismatches
minimap2
17 months ago by Mo ▴ 50
1
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0
replies
2.9k
views
Comment: Comment: How to discard alignments from SAM/BAM file that have mismatches
20 months ago by Mo ▴ 50
0
votes
0
replies
2.9k
views
Comment: Comment: How to discard alignments from SAM/BAM file that have mismatches
20 months ago by Mo ▴ 50
0
votes
2
replies
1.3k
views
guppy basecaller giving error while basecalling
base-calling guppy nanopore fast5
updated 20 months ago by 9.8k • written 20 months ago by ▴ 50
1
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1
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1.3k
views
Reads with highest MAPQ values from SAM files are showing mismatches to reference sequence and IGV classified them as supplementary reads
minimap Nanopore IGV
updated 20 months ago by 149k • written 20 months ago by ▴ 50
11
votes
4
replies
2.1k
views
how to sort a fasta file
fasta
updated 20 months ago by 165k • written 20 months ago by ▴ 50
0
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0
replies
3.9k
views
Comment: Comment: minimap's SAM file MAPQ value for the unique alignments
20 months ago by Mo ▴ 50
0
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3
replies
3.9k
views
minimap's SAM file MAPQ value for the unique alignments
minimap MAPQ RNAseq
20 months ago by Mo ▴ 50
0
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0
replies
1.6k
views
Comment: Comment: IGV grey vs white lines
20 months ago by Mo ▴ 50
0
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2
replies
1.6k
views
IGV grey vs white lines
minimap nanopore IGV
updated 20 months ago by 149k • written 20 months ago by ▴ 50
0
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0
replies
955
views
Comment: Comment: How to extract out gene specific reads from concatenated fastq file
21 months ago by Mo ▴ 50
0
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3
replies
955
views
How to extract out gene specific reads from concatenated fastq file
fastq gene-specific RNA-seq nanopore
21 months ago by Mo ▴ 50
26 results • Page 1 of 1
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