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Comment:
Comment: bedtools coverage, Use “stdin”
16 months ago by
javiflaja
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1
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2
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1.6k
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Comment:
Comment: bedtools coverage, Use “stdin”
16 months ago by
javiflaja
▴ 50
2
votes
0
replies
31k
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Answer:
Answer: Bed For Agilent Sureselect All Exon Kits ?
17 months ago by
javiflaja
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0
votes
1
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2.1k
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Comment:
Comment: Exome alignment and preprocessing: When I perform an exome alignment, should I u
17 months ago by
javiflaja
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2.1k
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Comment:
Comment: Exome alignment and preprocessing: When I perform an exome alignment, should I u
17 months ago by
javiflaja
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Comment:
Comment: Exome alignment and preprocessing: When I perform an exome alignment, should I u
17 months ago by
javiflaja
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Comment:
Comment: Exome alignment and preprocessing: When I perform an exome alignment, should I u
17 months ago by
javiflaja
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10
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10
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2.1k
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Exome alignment and preprocessing: When I perform an exome alignment, should I use a Ref Genome or Ref Exome .fasta?
vcf
pipeline
exome-alignment
bed
updated 17 months ago by
Jeremy Leipzig
22k • written 17 months ago by
javiflaja
▴ 50
1
vote
1
reply
672
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How do I specify the Recalibration_data.table for "PrintReads" in GATK 4.3, if the tool does not admit -BQSR as an option anymore?
BaseRecalibrator
BQSR
printreads
updated 17 months ago by
Ram
44k • written 17 months ago by
javiflaja
▴ 50
0
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0
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951
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Comment:
Comment: If I execute "AddOrReplaceReadGroups" on a sarted and duplicate-marked .bam fil
17 months ago by
javiflaja
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1
vote
2
replies
951
views
If I execute "AddOrReplaceReadGroups" on a sorted and duplicate-marked .bam file, do I have to re-sort and re-mark duplicates?
picard
AddOrReplaceReadGroups
bam
read-groups
updated 17 months ago by
Ram
44k • written 17 months ago by
javiflaja
▴ 50
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