Profile Posts Awards
Show
all questions tools blogs news tutorials forum answers comments
2
votes
1
reply
372
views
What is trait discoverability?
snp phenotype gene trait
updated 6 months ago by 151k • written 6 months ago by ▴ 60
0
votes
1
reply
544
views
Multi allelic variants extraction with plink
plink multiallelic-variants
updated 9 months ago by 11k • written 9 months ago by ▴ 60
0
votes
1
reply
7.0k
views
Comment: Comment: Obtain chromosome, position, and alleles based on a list of SNP names
9 months ago by _quantum_girl_ ▴ 60
0
votes
1
reply
7.0k
views
Comment: Comment: Obtain chromosome, position, and alleles based on a list of SNP names
9 months ago by _quantum_girl_ ▴ 60
0
votes
0
replies
1.4k
views
Comment: Comment: Get position in GRCh38 from rsid
9 months ago by _quantum_girl_ ▴ 60
0
votes
1
reply
1.4k
views
Comment: Comment: Get position in GRCh38 from rsid
9 months ago by _quantum_girl_ ▴ 60
0
votes
1
reply
14k
views
Comment: Comment: Get Snp Position From A Python Interface.
9 months ago by _quantum_girl_ ▴ 60
2
votes
1
reply
390
views
Filter vcf file by position AND alternative allele
bcftools vcf filter
updated 9 months ago by 12k • written 9 months ago by ▴ 60
1
vote
5
replies
1.4k
views
Get position in GRCh38 from rsid
snp rsid location
updated 9 months ago by 8.8k • written 9 months ago by ▴ 60
0
votes
0
replies
650
views
Comment: Comment: Fastest way to get rsid from SNP position
9 months ago by _quantum_girl_ ▴ 60
0
votes
3
replies
650
views
Fastest way to get rsid from SNP position
snp dbsnp annotation
updated 9 months ago by 166k • written 9 months ago by ▴ 60
0
votes
0
replies
766
views
Comment: Comment: Where can I download dbsnp in hg19?
9 months ago by _quantum_girl_ ▴ 60
0
votes
1
reply
766
views
Comment: Comment: Where can I download dbsnp in hg19?
9 months ago by _quantum_girl_ ▴ 60
3
votes
4
replies
766
views
Where can I download dbsnp in hg19?
dnsnp hg19
9 months ago by _quantum_girl_ ▴ 60
0
votes
0
replies
446
views
Comment: Comment: Detecting compound heterozygous
9 months ago by _quantum_girl_ ▴ 60
0
votes
2
replies
446
views
Detecting compound heterozygous
haplotype heterozygous
9 months ago by _quantum_girl_ ▴ 60
0
votes
0
replies
319
views
Good books or review papers on mendelian randomization and eQTLs?
eQTL randomization mendelian
10 months ago by _quantum_girl_ ▴ 60
0
votes
1
reply
1.3k
views
Comment: Comment: How to get gene name for 900k SNPs
10 months ago by _quantum_girl_ ▴ 60
0
votes
1
reply
1.3k
views
Comment: Comment: How to get gene name for 900k SNPs
10 months ago by _quantum_girl_ ▴ 60
0
votes
2
replies
1.3k
views
Comment: Comment: How to get gene name for 900k SNPs
10 months ago by _quantum_girl_ ▴ 60
9
votes
9
replies
1.3k
views
How to get gene name for 900k SNPs
biomart entrez pyensembl snp gene
updated 10 months ago by 166k • written 10 months ago by ▴ 60
1
vote
0
replies
1.3k
views
Answer: Answer: How to get gene name for 900k SNPs
10 months ago by _quantum_girl_ ▴ 60
8
votes
6
replies
1.6k
views
Why is UCSC lift over failing to convert a specific position?
UCSC liftover
updated 10 months ago by ▴ 630 • written 10 months ago by ▴ 60
0
votes
0
replies
775
views
Comment: Comment: QC exclusion of A/T or G/C alleles to avoid strand issues
12 months ago by _quantum_girl_ ▴ 60
0
votes
2
replies
775
views
QC exclusion of A/T or G/C alleles to avoid strand issues
quality-control SNV QC SNP
12 months ago by _quantum_girl_ ▴ 60
0
votes
0
replies
251
views
Databases with GoF (Gain of Function) annotations.
gof lof gain-of-function
12 months ago by _quantum_girl_ ▴ 60
0
votes
0
replies
904
views
Comment: Comment: How to choose --hwe threshold?
14 months ago by _quantum_girl_ ▴ 60
0
votes
2
replies
904
views
How to choose --hwe threshold?
plink hardy-weinberg quality-control qc
14 months ago by _quantum_girl_ ▴ 60
0
votes
1
reply
923
views
What do HAP A1 and HAP A2 mean in plink --freqx output?
plink
updated 18 months ago by ★ 3.1k • written 18 months ago by ▴ 60
0
votes
0
replies
464
views
Regenie to get burden
Regenie
updated 18 months ago by 45k • written 18 months ago by ▴ 60
5
votes
3
replies
988
views
Where to find info on VCF file format?
bcftools vcf
updated 19 months ago by 45k • written 19 months ago by ▴ 60
0
votes
1
reply
2.6k
views
Comment: Comment: How to filter vcf file by MAF using bcftools?
19 months ago by _quantum_girl_ ▴ 60
2
votes
4
replies
2.6k
views
How to filter vcf file by MAF using bcftools?
bcftools vcf
updated 19 months ago by 45k • written 19 months ago by ▴ 60
3
votes
4
replies
884
views
Unable to build applet in DNAnexus, .jar file not found
dnanexus applet
updated 19 months ago by 4.9k • written 19 months ago by ▴ 60
3
votes
2
replies
853
views
How to retrieve LoF and missense variants in WES data?
bcftools variants plink SNPs
updated 19 months ago by ▴ 130 • written 19 months ago by ▴ 60
1
vote
1
reply
819
views
Any online course for learning how to use PLINK?
plink
updated 20 months ago by ★ 3.1k • written 20 months ago by ▴ 60
3
votes
3
replies
1.1k
views
How to find variants in a specific gene in a cohort of 500k+ individuals?
variants plink SNPs CNV
updated 20 months ago by 166k • written 20 months ago by ▴ 60
0
votes
0
replies
406
views
How to find commutation using plink?
commutation plink
20 months ago by _quantum_girl_ ▴ 60
0
votes
0
replies
5.5k
views
Comment: Comment: From Imputed Snps To Cnvs
22 months ago by _quantum_girl_ ▴ 60
0
votes
0
replies
414
views
Methylation (Illumina arrays or Whole-genome bisulfite sequencing WBS) and WGS datasets?
array wgs methylation wbs dna
23 months ago by _quantum_girl_ ▴ 60
40 results • Page 1 of 1
Content Search
Users
Tags
Badges
Help About
FAQ
Access RSS
API
Stats

Use of this site constitutes acceptance of our User Agreement and Privacy Policy.

Powered by the version 2.3.6