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Comment:
Comment: Is there a proper way to choose bins in barplot
5 weeks ago by
QX
▴ 70
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482
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Comment:
Comment: Is there a proper way to choose bins in barplot
5 weeks ago by
QX
▴ 70
0
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0
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482
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Comment:
Comment: Is there a proper way to choose bins in barplot
5 weeks ago by
QX
▴ 70
3
votes
6
replies
482
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Is there a proper way to choose bins in barplot
visualization
plot
bar
5 weeks ago by
QX
▴ 70
1
vote
0
replies
564
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Answer:
Answer: CNV Analysis and Visualisation
5 weeks ago by
QX
▴ 70
2
votes
2
replies
305
views
statistical testing for MS/MS proteomics bulk samples
DEG
proteomics
updated 3 months ago by
ATpoint
87k • written 3 months ago by
QX
▴ 70
0
votes
0
replies
1.1k
views
Comment:
Comment: Gatk haplotyper
3 months ago by
QX
▴ 70
0
votes
1
reply
561
views
Comment:
Comment: coordinate vs contributions for the variables in PCA using FactoMineR
3 months ago by
QX
▴ 70
0
votes
0
replies
561
views
Comment:
Comment: coordinate vs contributions for the variables in PCA using FactoMineR
3 months ago by
QX
▴ 70
2
votes
4
replies
561
views
coordinate vs contributions for the variables in PCA using FactoMineR
PCA
updated 3 months ago by
Bastien Hervé
6.1k • written 3 months ago by
QX
▴ 70
0
votes
0
replies
797
views
Comment:
Comment: PCA for count data
4 months ago by
QX
▴ 70
0
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0
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797
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Comment:
Comment: PCA for count data
4 months ago by
QX
▴ 70
0
votes
1
reply
797
views
Comment:
Comment: PCA for count data
4 months ago by
QX
▴ 70
3
votes
6
replies
797
views
PCA for count data
PCA
4 months ago by
QX
▴ 70
0
votes
0
replies
616
views
Comment:
Comment: DEseq2 with different designs matrix
5 months ago by
QX
▴ 70
0
votes
3
replies
616
views
DEseq2 with different designs matrix
DEseq2
5 months ago by
QX
▴ 70
0
votes
0
replies
220
views
Different position for same gene using annotatePeak from ChIPseeker
ChIPseeker
ATACseq
5 months ago by
QX
▴ 70
0
votes
0
replies
209
views
plotHeatmap from deeptools explain
atac-seq
5 months ago by
QX
▴ 70
0
votes
0
replies
1.1k
views
Comment:
Comment: difference between macs2 callpeak using bam and bed file
6 months ago by
QX
▴ 70
1
vote
1
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1.1k
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Comment:
Comment: difference between macs2 callpeak using bam and bed file
6 months ago by
QX
▴ 70
5
votes
4
replies
1.1k
views
difference between macs2 callpeak using bam and bed file
macs2
atac-seq
6 months ago by
QX
▴ 70
0
votes
0
replies
603
views
Comment:
Comment: trimming 151bp to shorter k-mer in ATAC-seq analysis
6 months ago by
QX
▴ 70
0
votes
0
replies
3.5k
views
Comment:
Comment: ATAC-seq peak calling
6 months ago by
QX
▴ 70
0
votes
1
reply
709
views
Comment:
Comment: call peak for all replicates in all conditions using macs2
6 months ago by
QX
▴ 70
0
votes
0
replies
709
views
Comment:
Comment: call peak for all replicates in all conditions using macs2
6 months ago by
QX
▴ 70
0
votes
1
reply
603
views
Comment:
Comment: trimming 151bp to shorter k-mer in ATAC-seq analysis
6 months ago by
QX
▴ 70
2
votes
5
replies
709
views
call peak for all replicates in all conditions using macs2
macs2
ATACseq
updated 6 months ago by
zau saa
▴ 150 • written 6 months ago by
QX
▴ 70
0
votes
0
replies
2.2k
views
Comment:
Comment: How get density plot TSS region for genes of interest
6 months ago by
QX
▴ 70
1
vote
4
replies
603
views
trimming 151bp to shorter k-mer in ATAC-seq analysis
ATAC-seq
6 months ago by
QX
▴ 70
0
votes
0
replies
10k
views
Comment:
Comment: Using featureCounts and DESeq2 to look at differences between ATAC-seq condition
6 months ago by
QX
▴ 70
0
votes
1
reply
2.2k
views
Comment:
Comment: How get density plot TSS region for genes of interest
6 months ago by
QX
▴ 70
0
votes
1
reply
1.0k
views
Comment:
Comment: which bed file should be used for deeptools computeMatrix
6 months ago by
QX
▴ 70
0
votes
1
reply
1.0k
views
Comment:
Comment: which bed file should be used for deeptools computeMatrix
6 months ago by
QX
▴ 70
3
votes
6
replies
1.0k
views
which bed file should be used for deeptools computeMatrix
atac-seq
deeptools
updated 6 months ago by
Ming Tommy Tang
★ 4.6k • written 6 months ago by
QX
▴ 70
0
votes
0
replies
2.2k
views
Comment:
Comment: Plotting chip signal at TSSs with deeptools
6 months ago by
QX
▴ 70
0
votes
0
replies
250
views
reference-point setting from computeMatrix
ATACseq
6 months ago by
QX
▴ 70
0
votes
0
replies
216
views
which distance used for kmeans in deeptools plotHeatmap
atac
deeptools
6 months ago by
QX
▴ 70
1
vote
1
reply
411
views
merge replicate for bigWig files from macs2 peak calling
ATAC-seq
updated 6 months ago by
ATpoint
87k • written 6 months ago by
QX
▴ 70
0
votes
0
replies
586
views
Comment:
Comment: MACS2 for multiple conditions in ATACseq analysis
6 months ago by
QX
▴ 70
0
votes
1
reply
586
views
Comment:
Comment: MACS2 for multiple conditions in ATACseq analysis
6 months ago by
QX
▴ 70
0
votes
0
replies
6.5k
views
Comment:
Comment: How to create SAF from text file for FeatureCounts
6 months ago by
QX
▴ 70
0
votes
1
reply
929
views
Comment:
Comment: featureCounts output
6 months ago by
QX
▴ 70
4
votes
4
replies
586
views
MACS2 for multiple conditions in ATACseq analysis
mac2
6 months ago by
QX
▴ 70
4
votes
4
replies
798
views
Increase the memory and core usage of R
R
updated 6 months ago by
Mensur Dlakic
★ 29k • written 6 months ago by
QX
▴ 70
0
votes
0
replies
600
views
Comment:
Comment: is that statistical correct to use DEseq2 for proteomics data
6 months ago by
QX
▴ 70
3
votes
2
replies
600
views
is that statistical correct to use DEseq2 for proteomics data
proteomics
DEseq2
updated 6 months ago by
ATpoint
87k • written 6 months ago by
QX
▴ 70
0
votes
0
replies
798
views
Comment:
Comment: Increase the memory and core usage of R
6 months ago by
QX
▴ 70
1
vote
0
replies
929
views
Comment:
Comment: featureCounts output
7 months ago by
QX
▴ 70
4
votes
8
replies
929
views
featureCounts output
macs2
featureCounts
updated 6 months ago by
rfran010
★ 1.3k • written 7 months ago by
QX
▴ 70
0
votes
0
replies
929
views
Comment:
Comment: featureCounts output
7 months ago by
QX
▴ 70
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