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2
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2
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214
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statistical testing for MS/MS proteomics bulk samples
DEG proteomics
updated 27 days ago by 85k • written 27 days ago by ▴ 60
0
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0
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772
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Comment: Comment: Gatk haplotyper
27 days ago by QX ▴ 60
0
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1
reply
370
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Comment: Comment: coordinate vs contributions for the variables in PCA using FactoMineR
4 weeks ago by QX ▴ 60
0
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0
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370
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Comment: Comment: coordinate vs contributions for the variables in PCA using FactoMineR
4 weeks ago by QX ▴ 60
2
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4
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370
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coordinate vs contributions for the variables in PCA using FactoMineR
PCA
updated 4 weeks ago by 5.9k • written 4 weeks ago by ▴ 60
0
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0
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518
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Comment: Comment: PCA for count data
5 weeks ago by QX ▴ 60
0
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0
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518
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Comment: Comment: PCA for count data
5 weeks ago by QX ▴ 60
0
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1
reply
518
views
Comment: Comment: PCA for count data
5 weeks ago by QX ▴ 60
3
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6
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518
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PCA for count data
PCA
5 weeks ago by QX ▴ 60
0
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0
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474
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Comment: Comment: DEseq2 with different designs matrix
11 weeks ago by QX ▴ 60
0
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3
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474
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DEseq2 with different designs matrix
DEseq2
11 weeks ago by QX ▴ 60
0
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0
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152
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Different position for same gene using annotatePeak from ChIPseeker
ChIPseeker ATACseq
12 weeks ago by QX ▴ 60
0
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0
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160
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plotHeatmap from deeptools explain
atac-seq
12 weeks ago by QX ▴ 60
0
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0
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601
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Comment: Comment: difference between macs2 callpeak using bam and bed file
3 months ago by QX ▴ 60
1
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1
reply
601
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Comment: Comment: difference between macs2 callpeak using bam and bed file
3 months ago by QX ▴ 60
5
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4
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601
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difference between macs2 callpeak using bam and bed file
macs2 atac-seq
3 months ago by QX ▴ 60
0
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0
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408
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Comment: Comment: trimming 151bp to shorter k-mer in ATAC-seq analysis
3 months ago by QX ▴ 60
0
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0
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3.2k
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Comment: Comment: ATAC-seq peak calling
3 months ago by QX ▴ 60
0
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1
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486
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Comment: Comment: call peak for all replicates in all conditions using macs2
3 months ago by QX ▴ 60
0
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0
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486
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Comment: Comment: call peak for all replicates in all conditions using macs2
3 months ago by QX ▴ 60
0
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1
reply
408
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Comment: Comment: trimming 151bp to shorter k-mer in ATAC-seq analysis
3 months ago by QX ▴ 60
2
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5
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486
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call peak for all replicates in all conditions using macs2
macs2 ATACseq
updated 3 months ago by ▴ 150 • written 3 months ago by ▴ 60
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0
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2.0k
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Comment: Comment: How get density plot TSS region for genes of interest
3 months ago by QX ▴ 60
1
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4
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408
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trimming 151bp to shorter k-mer in ATAC-seq analysis
ATAC-seq
3 months ago by QX ▴ 60
0
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0
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9.5k
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Comment: Comment: Using featureCounts and DESeq2 to look at differences between ATAC-seq condition
3 months ago by QX ▴ 60
0
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1
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2.0k
views
Comment: Comment: How get density plot TSS region for genes of interest
3 months ago by QX ▴ 60
0
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1
reply
671
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Comment: Comment: which bed file should be used for deeptools computeMatrix
3 months ago by QX ▴ 60
0
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1
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671
views
Comment: Comment: which bed file should be used for deeptools computeMatrix
3 months ago by QX ▴ 60
3
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6
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671
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which bed file should be used for deeptools computeMatrix
atac-seq deeptools
updated 3 months ago by ★ 4.5k • written 3 months ago by ▴ 60
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0
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2.0k
views
Comment: Comment: Plotting chip signal at TSSs with deeptools
3 months ago by QX ▴ 60
0
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0
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186
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reference-point setting from computeMatrix
ATACseq
3 months ago by QX ▴ 60
0
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0
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152
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which distance used for kmeans in deeptools plotHeatmap
atac deeptools
3 months ago by QX ▴ 60
1
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1
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267
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merge replicate for bigWig files from macs2 peak calling
ATAC-seq
updated 3 months ago by 85k • written 3 months ago by ▴ 60
0
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0
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385
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Comment: Comment: MACS2 for multiple conditions in ATACseq analysis
3 months ago by QX ▴ 60
0
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1
reply
385
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Comment: Comment: MACS2 for multiple conditions in ATACseq analysis
3 months ago by QX ▴ 60
0
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0
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6.0k
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Comment: Comment: How to create SAF from text file for FeatureCounts
3 months ago by QX ▴ 60
0
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1
reply
600
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Comment: Comment: featureCounts output
3 months ago by QX ▴ 60
4
votes
4
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385
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MACS2 for multiple conditions in ATACseq analysis
mac2
3 months ago by QX ▴ 60
4
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4
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581
views
Increase the memory and core usage of R
R
updated 3 months ago by ★ 28k • written 4 months ago by ▴ 60
0
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0
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429
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Comment: Comment: is that statistical correct to use DEseq2 for proteomics data
4 months ago by QX ▴ 60
3
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2
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429
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is that statistical correct to use DEseq2 for proteomics data
proteomics DEseq2
updated 4 months ago by 85k • written 4 months ago by ▴ 60
0
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0
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581
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Comment: Comment: Increase the memory and core usage of R
4 months ago by QX ▴ 60
1
vote
0
replies
600
views
Comment: Comment: featureCounts output
4 months ago by QX ▴ 60
4
votes
8
replies
600
views
featureCounts output
macs2 featureCounts
updated 3 months ago by ★ 1.3k • written 4 months ago by ▴ 60
0
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0
replies
600
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Comment: Comment: featureCounts output
4 months ago by QX ▴ 60
0
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0
replies
600
views
Comment: Comment: featureCounts output
4 months ago by QX ▴ 60
0
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1
reply
539
views
Comment: Comment: input for gatk VariantAnnotator --dbsnp
4 months ago by QX ▴ 60
0
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0
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539
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Comment: Comment: input for gatk VariantAnnotator --dbsnp
4 months ago by QX ▴ 60
0
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1
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539
views
Comment: Comment: input for gatk VariantAnnotator --dbsnp
4 months ago by QX ▴ 60
2
votes
6
replies
539
views
input for gatk VariantAnnotator --dbsnp
VariantAnnotator gatk
updated 4 months ago by 147k • written 4 months ago by ▴ 60
116 results • Page 1 of 3
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